Syngnathus scovelli (Gulf pipefish): 125974850
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Entry
125974850 CDS
T08785
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125974850 (tmc4)
03037 Cilium and associated proteins [BR:
sscv03037
]
125974850 (tmc4)
Transporters [BR:
sscv02000
]
Other transporters
Pores ion channels [TC:
1
]
125974850 (tmc4)
Cilium and associated proteins [BR:
sscv03037
]
Other cilia and associated proteins
Stereociliary proteins
125974850 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3270
Motif
Other DBs
NCBI-GeneID:
125974850
NCBI-ProteinID:
XP_049585671
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All DBs
Position
9:complement(11121550..11125701)
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AA seq
728 aa
AA seq
DB search
MDPWKQGSNDNGYTEVGDYLYSNSQESLRLRRPSSQGSNRNYPHFKWNLAATEEEEEDEV
DGYRESGEEPREIHTIPLPMALKRAVRQVQEMQVPVLSSRLTSWKQRKRKTLKKIKNNTR
EFLNLFMLWRKSLQQIGGNFGGGVQSYFLFLRFLVVLNFVSFLLIAGFVFIPSVVFRSLD
SISVNNTGPEECRKYDPNPQVLVAFYYYILDFLSGTGYMEYSYLFYGYYNSTLVGDNNFS
YNIPLAYLFTAVFYFAFCLICILARMGTAARVAVATGGGVVGNYSMIVFTGWDYGCLGDR
ATKLKQRNIHYRLQVDLEEQLMKQKVAALTFCQKLILYSLRIFMAFVTLGLIGATCYGIF
AATIFSQGKSGQSGILGLIFEYLPSIVITAGNFLVPLLCDQIGLLERYPPSTTVILALLR
AVFLRLVSLGVLLFTLWGQITCQVDTNKCDLCQYNHEEYPCWETRIGQEMYKLTLFDLIV
TIAVLVLVEFPRRSEIPSVSHLHFFGGGSCSVMFVVIRMVVDNWSNKLTRWVGRQEFVVS
ANVLGLVYGQTVVWVGALFCPLLPVINTAKFVILFYCKKVTLFNNCRPAHKTFRSTTSTF
VFLVVLLFGWGMATLVMIYSVAEIQPSMGCGPFRFFPYMWAIVPMSFDRLSGVTQEFLFF
IGSQAFSIPLFALSCVLMGYFIALAAVYGKSLTLLRAQLKQEGRDKQFLVKQIENLSRQL
QIPTRDFT
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggacccctggaaacaaggctcaaatgacaatggctacactgaagtcggcgattactta
tattcgaatagccaagagtcgctgagattaagacgtccttcatctcaagggtccaatcgg
aactaccctcacttcaagtggaacctggcagccacagaagaagaagaggaggatgaagtg
gatggatacagagaatcgggcgaggagcctcgggagatccataccatccctctgcccatg
gcgctgaaaagggctgtgaggcaggtgcaggaaatgcaggtgcccgtactttcctccagg
ctgacatcttggaaacaaaggaaacgcaaaaccctcaagaaaatcaaaaacaacaccaga
gagttcctaaacttatttatgctttggaggaagtctttgcaacagattggaggaaacttt
ggcggcggtgtccagtcttatttcctgttcctgcgtttcctggtggtactcaattttgtc
tcgtttttactgatcgccgggttcgtcttcatccccagcgtcgttttcagatctctcgac
agcatctctgtcaacaacactgggcccgaggaatgcaggaaatacgatcccaatcctcaa
gtcttggtggcgttctattattacatccttgacttcctttcgggaacgggttacatggag
tattcgtacctgttttatggctactacaacagcactctggtgggtgacaacaacttctcc
tacaacatcccgctggcctatctcttcaccgccgtcttctactttgcattttgcctcatc
tgcatcttggcccggatggggacagcagctcgagttgccgtggcgacgggaggtggcgtc
gtgggcaactacagcatgatcgtgttcacgggctgggactacgggtgcctgggagaccga
gccaccaagctgaagcagaggaacatccactatcggctccaggtagatctggaggagcaa
cttatgaagcagaaagtagccgctctgaccttctgtcaaaaactaatcttgtactcgctt
cgcatcttcatggcctttgttactttggggctcatcggggcaacctgctacggcatcttc
gcggccacgattttcagtcagggcaagagtggtcagagtgggattctgggtttgattttt
gagtatctgccctccattgtgatcaccgctggtaacttcctggtgccattactctgtgac
cagatcggcctgcttgaacgatacccgcccagcaccacagtcatactggccctcttgagg
gcagtgttcttgcgcttggtgagtttgggagttctgctgttcaccctgtggggtcagatc
acatgccaggtggacacgaacaagtgtgacctgtgccagtacaaccacgaggagtacccg
tgctgggaaactcgaataggacaggaaatgtacaagttgacgctttttgacctcattgtt
accatcgccgtactcgtgttggtcgagtttccacgcaggtctgaaataccgtctgtctct
catttacatttttttggggggggatcctgtagtgttatgtttgtggttatcaggatggtg
gtggacaactggtccaacaagctgactcggtgggtgggtcggcaggagtttgtggtgtca
gccaacgtgctgggcctggtgtacggccagacggtggtctgggtgggggctcttttttgc
cccctgctgcctgttatcaatacagccaagtttgtcatcctcttctactgcaagaaggtt
acgctgttcaacaactgtcggcccgcccacaagactttccgctccaccacctccacgttc
gtcttcttggtggtgctgctgttcggatggggcatggccactctggttatgatctacagt
gtggctgagatccaaccatctatgggctgcggccccttccgcttcttcccctacatgtgg
gccatcgttccgatgtctttcgaccgcctctcgggagtcacgcaggagtttctcttcttc
attggttcccaggccttctccatccctctgtttgccttgtcttgcgtactgatgggttat
ttcatcgccctggctgctgtttatggaaaaagtcttactttgctcagagctcaactcaaa
caggagggccgtgacaagcagttcttggtcaaacagattgagaatctgagtcgtcaactt
cagataccgacacgagactttacgtga
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