Syngnathus scovelli (Gulf pipefish): 125974860
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Entry
125974860 CDS
T08785
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125974860 (dennd4b)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125974860 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
SPA
MRAP
Motif
Other DBs
NCBI-GeneID:
125974860
NCBI-ProteinID:
XP_049585698
LinkDB
All DBs
Position
9:complement(16230583..16244981)
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AA seq
1441 aa
AA seq
DB search
MLCLGGCTGAMTEDKCPQLLDYFVVAGLDPAGPWRPLAQAAGRRGAEPVTDLAVIARGLG
EDVPQGFTCIDKSLGGHSAELSAGLINNPHLYLCYRRGLHKPPLLELGVLYEGKEQPKVG
WNVIETTPYSRSANLSSAAGPAAQRVFLTYRRAADERGPHSLAITDISVLLPGKGEVAPH
TFSRVDKSLNTGMWGPAVFVCFKRAVAKANALLYEAALLSRYPACDRDAFPLPESVPVFC
LPMGVALESWPADAKYRLPVFSTFVLTSASGDKVYGAAIQFYEAFPREALSEHQSVRLGL
LSVLDRRPVPERSLQAKKSICVLSHWPFFDVFQKFLTFVYRYSVSGPHVLPLEKHISSFM
HNVPFPSPQRPRILVQLSPNDNLLLCQPVSSPLPLSGASFLKLLQNLGPANACTLLLAVL
VEHKVLLHSLRPDVLTAVAEALVSMTFPLRWLCPYIPLCPLQMAEVLLAPVPFIVGVHSS
YFDLHCPPADVVCVDLDTNTLFQSDDKKPLSWRSLPRKPAKTLLGALGNLHKTLEQICSP
GQEEATLEFLLTDFDQTYRRQKQLEADIQEAFLRFMSVLLRGYRAFLLPITQPSSATATD
CSSLFNLQGFLKSRERTQQKFYCQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKVDV
DKPEYVRLVDVDESHCGERTVFIMPPEQPTQDDGSECPARYSYDTFPALRAELFDRPLDQ
LYVPAKGSTPSSPAPRRTKQELKVAQRRAQSCCGSPDMWCKCLLGHMYALWFICLPTFVR
AQSTKVPALHAAFDVLKDTESRKVLLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGV
TPNTITYGYYNKAVLESKWPSVNRGGRLLWAKLRNVLLAIALFRQPVKIRRRARAVPEER
WPHPHLPLIRQASWSGLSESSSHESLTGSLAKSSSLSSIKTPAQTTSNGKSGRCRGGVSG
KPPPGPPAGVLVRRSDICLSGFYTAAENNSNWEAGARLGRAASACETVLVDENDNKVSPS
GRGLAGRLQRLLTPTRHRGAVRRAASVDERRPSEPVPASTSGRRLSEQRRSRKSQVAETL
LKAKERLAGATSESSLSLGSDAEPADAPWLPRHSWDANQDVAGMEVLMSSCSRCRACGCL
VYDEEIMAGWTPDDSNLNSRCPFCAASFVPFLNARICDLRLHASSEDRGKIAARPPDEHP
GTPWCNGVGDNSASESDVVAVAYVSPLVLRKELESLLDHEGEAVLGQPQFLESHCIIFWN
LLWFFQRLGLPSHLLRLLGEPAQGSCVRVRLQWDTLTPDPDAWPPLYVLWRLHSGGPVRG
SHWRRHNHPFTLAFLEEVLRCVGMNEIHKAVTLFLDTVDKARRHAHSAAPPLRRSVYREL
LFLTLAAMGQDHAGAFDKKYKVAYVRLSGQLGKEELRQRRAQPPSAKALDCRRSFQPPLQ
C
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtttaggaggctgcaccggcgccatgacggaggacaaatgcccacagctgctg
gactactttgtggtagcgggtctggacccggcgggaccctggcggcctctggcacaggcg
gcgggccgccggggggcggagcccgtgactgatctggcggtgatcgcccgcggcctaggc
gaggatgtgccacagggattcacctgcatcgacaagtcgctgggcggccactcggccgag
ctgagcgccggtctcatcaacaacccgcacctctacctctgctacaggaggggcctccac
aagccccccctcctcgagctcggggtgttgtacgagggaaaggaacagcccaaggtgggc
tggaatgtgatcgagaccacaccctacagccgctcggccaacctgagctccgccgcaggc
ccggcggcgcagcgcgtcttcttgacataccgccgagcggcggacgagcgaggcccgcac
tcactggctataaccgacatcagcgtgctgctgcccggcaagggtgaggtggcgccgcac
accttcagccgcgtggacaagagcctcaacacgggcatgtggggtccggctgtgtttgtg
tgcttcaagcgggcggtggccaaagccaacgcactgctttacgaggcggcgttgctgagc
cgctaccctgcctgcgaccgggatgccttcccgcttcccgagtcggtgcctgtcttctgc
ctccccatgggtgtggctctggagagctggcctgccgacgccaagtacaggctgcccgtc
ttctccaccttcgtgctcacctcggccagcggcgacaaggtgtacggcgcggccatccaa
ttctacgaggcattccctcgggaggcgctgtcggagcaccagagcgtgcgcctgggcctg
ctgagcgtgctggaccgccggcctgtccctgagcgcagtctacaggccaagaagagcatc
tgcgtgctctcgcactggcccttttttgacgtcttccagaagttcctcacctttgtctac
cgatactctgtctccggaccgcatgtgctgcccttggagaagcacatctccagcttcatg
cacaacgttcccttcccgtcccctcagcggcctcgcatcctggttcagctttcaccgaat
gacaaccttctcctctgccagcctgtttcctcgccgctgcccctcagcggagcaagcttc
ctgaagctcctgcagaacctgggcccggccaatgcctgcacgctgctgctagccgtgctg
gtggagcacaaagtcctgctgcattcactgcggcccgacgtcctgacggccgtggccgag
gcgcttgtttcgatgaccttcccgctacgctggctgtgcccctacatcccgctgtgcccg
ctccagatggccgaagtgttactggcgcccgtgcccttcatcgtgggcgtgcactccagc
tactttgacctccactgccctcccgccgacgtggtctgtgtcgacctggacaccaacacg
ctcttccagtcagacgacaagaagccgttgtcatggcgatcgttacccaggaagccggcc
aagacgctgttgggcgccctgggcaacctgcacaagacactggagcagatttgctctccg
ggccaggaggaggccacgctggagttcctgctgacggactttgaccagacataccgtcgg
cagaagcagctggaggccgacatccaggaagccttcctgcgcttcatgagcgtgctgctg
cgtggttaccgcgccttcctcctgcccatcacacagccgtcctctgccaccgccaccgac
tgcagctccctcttcaacctgcagggcttcctgaagtctcgcgagcgtacccagcagaag
ttctactgccagctgacgcgcacgcagatgttcacgcagttcatcgaggagtgctccttc
gtcagcgaccgccacgcctgcctcgagttctttgatgagtgcgtgcaaaaggtggacgtg
gacaaaccggagtatgttcgcctggtggatgtggacgagagccactgcggcgagcgtacc
gtcttcatcatgcctcccgagcagcccacccaagacgacggctcagagtgcccggcccgc
tacagttatgacaccttcccagccttgagggcagagctctttgaccgcccactggaccaa
ctgtacgtccctgccaaaggcagcacgcccagtagccccgccccgagacgcaccaaacag
gagttgaaggtggcacagcggcgcgcgcagagctgctgcggctcgcccgacatgtggtgc
aagtgtctgctgggtcacatgtatgccctctggttcatctgcctgcccacctttgtgcgc
gcccagagcaccaaggtgcctgccctccatgccgccttcgacgtcctcaaggacacagag
agcaggaaggtgctgctgcctgatgaggtgtgttacagaatcctgatgcagctgtgcggc
cagtacggtcagcccgtgcttgccgtgcgcgtcctcctggagatgaagaaagcgggcgtc
acacccaataccatcacatacggatactacaacaaggctgtcctggagagcaaatggccg
tcggtcaatcggggcgggcgtttgctttgggccaagctgaggaacgtgctgctggccatc
gccctctttaggcagccagtcaaaattcgccgccgcgcccgagccgttccggaagagcgc
tggccccaccctcacttgcctctgattcgtcaagccagctggagcggcctgagcgaaagc
tccagtcatgaatctctgacgggatccctcgccaagagcagcagcctgagcagcatcaag
acgcctgcacaaaccacaagcaacgggaagtcgggccgctgccgtggtggcgtatccggc
aagccccccccggggccccccgctggggtcctggtacgtcgcagcgacatctgcttgtcc
ggcttctacaccgctgccgagaacaacagcaactgggaggcgggggccaggttgggaaga
gcagcgagcgcgtgcgagacggtgttggtggacgagaatgacaacaaagtgtcgccgtcg
ggccgaggcctggcggggcggctacaacggctcctgacgcccacacggcaccggggggcg
gtccgccgcgctgccagtgtggacgagcggcggcccagcgagccagtacccgcctcaact
tcgggacgccggctctctgagcagcgccggtccaggaagtcgcaggtggcggaaacgctg
ctgaaagccaaagagcgcctcgccggcgccacctcggagagctcgctctcgctgggcagt
gacgctgagccagcggacgcaccctggctgccgcgccactcctgggacgccaatcaagat
gtggcggggatggaggttctgatgtcgagctgctcgcggtgccgggcgtgcggctgcctg
gtctacgatgaggagatcatggcagggtggacgcccgacgactccaacctcaactcccgc
tgccccttttgcgccgcctcttttgtgcccttcctcaacgcccgcatctgcgacctccga
ctccacgccagcagcgaggacaggggcaagatcgctgcccggccacccgacgaacatccg
gggaccccgtggtgtaacggcgtgggtgacaactcggcctctgagagtgacgtggtggcg
gtggcatacgtgagtccgctggtgctgcgcaaggagctggaaagccttctggaccatgag
ggcgaggcggtgctgggccagccgcagttcctggagagccactgcatcatcttctggaac
cttctgtggttcttccagcgccttggcctgcccagccacctgctacgtctccttggcgag
ccggcgcagggctcgtgtgttcgcgtgaggctccagtgggacaccctgacccctgacccc
gacgcatggccgcccctctacgtgctgtggcgtcttcacagcggcgggcctgtgcgcggc
tcccactggcggcgccacaaccaccctttcacactggccttcctggaggaggtcctgcgc
tgtgtgggcatgaatgaaatccacaaagccgtcacgctcttcctcgacactgtcgacaag
gcacgccgccatgcccactctgctgctccgccgctccgcaggagcgtgtaccgggagttg
ctgttcctgacgctggcggcgatgggccaggatcacgcgggcgctttcgacaagaagtac
aaagtggcgtacgtgcggctgagtggccagctgggcaaagaagagctgcgccagaggaga
gctcagcctcccagcgctaaagccctcgactgcagacgtagcttccagccgccgctccag
tgctga
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