Syngnathus scovelli (Gulf pipefish): 125974903
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Entry
125974903 CDS
T08785
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125974903 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PH_9
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
125974903
NCBI-ProteinID:
XP_049585788
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Position
9:complement(5656737..5689439)
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AA seq
533 aa
AA seq
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MAVVLTSVQESGFVEVLVRARWHKVWAHLNEEALTLSCEDDGVNSNGVVTNGSYLDNNNS
NNGPRLPDLPEPVPETIANRKRCVKVTKQDVGGLGISIKGGRENKMPILISKIFKGLAAD
QTQALYVGDAILSVNGFNLRDASHDEAVQALKRAGKDVTLEVKYLREATPYVKKGSPVSE
IGWETPPPESPRFGSTPITTSPSSPETRSPPHPQPSLSLQGDRRCIPLKMCYVTRAMTTV
DPDNRQVELHSPDARHTVVLRCPDQPSALTWFSTMHAVTSTLTQQALAEVIHHKTRSGVA
GSKEIRHLGWLAGKQSESEKQCWKPVLVVVTDKDLLLYDSLPRSKEAWQSPAHTYPLLAT
RLVHSGPDTGSPYSGTELFFATRTGTRLGIETHLFRAETSKDLSLWTRQIVNGCHASAEM
IKEVSTSCLYLGQESRLVIHYEQGFSVLAEPKVQDVENGNDGRRHSPTKIRVLLSYPFEK
LRMSSDDGVRMLFLDFGGKEGEIQLDLHSCPKPIVFIVHSFLSAKISRLGLVA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggccgtagtcttaacgagcgtgcaggagagtggatttgtggaggttctcgtgcgggct
cgctggcacaaagtttgggcgcacttaaacgaggaggcgctcacgttgagctgcgaggac
gacggcgtcaactccaacggagtcgtcaccaatggatcctaccttgacaacaacaattcc
aacaatggtccgaggctgccggacctgcccgaacccgtgccggagaccatcgccaacagg
aagcggtgcgtcaaggtgaccaagcaggacgtcggcggactggggatcagcattaaaggc
ggccgggagaataagatgcccatcctgatcagtaagatcttcaaggggttggctgcggac
cagacgcaggcgctatacgtcggggacgccatcctgtccgtcaatgggttcaacctgagg
gacgcgagccacgacgaggcggtgcaggcgctcaaacgggctggcaaggacgtgactctg
gaagtcaagtacctgcgagaggccacgccgtatgtcaaaaagggctcacctgtgtcagag
atcggatgggaaacccccccacctgagtcgccacgtttcggcagcactcccatcaccacc
tctccttcctccccggaaactcgaagtcctcctcatccccagccttccttgtccctgcaa
ggcgataggagatgcattccacttaaaatgtgttacgtaacccgagctatgaccacagta
gatccagacaacagacaagtggagctgcactcccctgacgccagacacactgtggtactg
cgctgtccagaccagccatctgccctcacttggttctccacaatgcatgctgtcacatca
acactgactcagcaagcactagccgaggtgattcatcacaaaaccaggtcaggggttgct
ggcagcaaagagatccgacacctgggatggctggcagggaagcaaagtgagagtgagaag
cagtgctggaaacctgtgctggtggtggtgacggacaaagacctgctgctctatgacagc
ctgccacggagcaaggaagcctggcagagtccagcacacacgtatcctctactagctaca
cgtctggtgcactctgggcctgacacggggtctccttactcgggcaccgagctcttcttt
gccactcgaaccggcactcgcctcggaatcgagactcatcttttccgagctgaaaccagc
aaggatttatccctgtggactcgacaaatagtcaacggctgtcacgcatcagccgagatg
atcaaagaagtcagtaccagttgtctttacctgggtcaggagtcccggctggtgatccac
tacgagcaaggcttctccgtgttagctgaacccaaagtccaagacgttgagaacgggaac
gacggacgacgccatagtccaaccaaaatccgagtgctcctgtcctaccctttcgaaaaa
ctgaggatgtcatcagacgatggagttcgaatgctgttcctggactttggaggaaaggaa
ggggagattcaactggacctccactcgtgccccaagccaatcgtctttatcgtccactcc
ttcctctctgctaagatctccaggctgggcttagtggcctga
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