Syngnathus scovelli (Gulf pipefish): 125974945
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Entry
125974945 CDS
T08785
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125974945 (khdc4)
Spliceosome [BR:
sscv03041
]
Complex B
Other components
Prp19-related factors
125974945 (khdc4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
125974945
NCBI-ProteinID:
XP_049585863
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All DBs
Position
9:complement(10996821..11002282)
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AA seq
658 aa
AA seq
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MSFGGSQNGGRRASKWDQPGPGCGGPGEAESAPTGALDAAAAVAAKINAMLVAKGKLKPS
QIGTPGPVEKVLGIGKPQVPTKAKDDLVVAEVEINDVPITCRNLLTRGQTQDEISKVSSA
AVSTRGRYMTAEEKGKAPPGERPLYLHVQGQTRELVDRAVNKIKEIITNGVVKAATASSS
VSSSFSSVAPAVTVYQQAPPPSLPPMTHHKPHFQGGMHYVQDKIFVGLEHAIPGFAVKER
VEGPNCSYLQHIQGETGAKVFLRGKGSGCLEPTSGREAFEPMYIYISHPKPEGLAAAKTL
CQNLLQTVHAEYSRFLSQMSSMMPSQQGFAQPPVMNGMPPQPPYYPPAGFQPGYPMPVPP
PQNQPPPMPFSVPPPMPPPVPPKVVLPQFPPTPVPPPPPPNLAPRLCPAPPVSAPLPVSV
PPPVLPPVPVPAPVLPPTPAPVPPPASVVQTVPPMSYAPPAVAPPKGPPPPSVTANPAQK
RRFTEEVPDERDSGLLGYQHGPIHMTNLGAGFSAGSSETAGPPPSSSSGPTTERDGTVIP
RSSRELRARPTRDSRQLMPPPPLPVNGVRPKMEERRPPQGPVAEPVAKRLKTGLVAYAGD
SSDEEEEHPSSKASGSGNPGGSPSTSLDWIQGYRCPPPPPPRAKTQPQQQSMPFWMAP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtggaagtcaaaacggcggccgccgcgctagcaaatgggaccagccaggt
cccggttgtgggggaccgggggaggctgagtcggcccctaccggggctctggacgccgcc
gccgcggtggccgccaagattaacgccatgctggtagccaagggcaagctcaagccctcg
cagatcggcacacctgggcccgttgaaaaggttctgggcattgggaaacctcaggtgcca
accaaggcgaaagacgacctggtggtggcggaggtcgagatcaatgacgtcccgatcaca
tgccggaatctcttgacgcgaggacaaacgcaggatgagatcagcaaagtgagcagcgct
gccgtatccaccagaggacgctacatgactgcagaggagaagggcaaagcgccacccggg
gagcggcctctgtatctgcacgttcagggacagacgcgggagcttgtggaccgggctgta
aacaaaatcaaggagatcatcaccaacggggttgtgaaagcagcgaccgcctcgtcctcg
gtgtcctcgtccttctcttccgtcgcgcctgcagtgacggtttatcagcaagcacctcct
ccttcgctaccaccgatgacacatcataagccgcacttccagggcgggatgcactatgtt
caggataagatctttgtggggctggagcacgccatcccaggctttgccgtcaaagagcgc
gtggagggtcctaactgctcatacctgcagcacatccagggcgagactggagccaaagtc
ttcctcagggggaaaggctcgggctgcctggagcctacgtctggacgagaggcctttgag
cccatgtacatctacatcagccatcccaaaccagaaggtcttgcagcagccaaaacattg
tgtcaaaacttgcttcaaactgtccatgcagagtattctcgtttcctctctcaaatgagc
tcaatgatgccttcacaacaaggcttcgcacagcccccagtgatgaatgggatgcccccg
cagcccccctactatccgccagccggcttccagccgggctaccccatgccggtgcccccg
ccccagaaccagcccccacccatgcccttctctgtgccgcctcccatgcccccacctgtg
ccacccaaggttgtcctccctcagttcccgcctaccccggtgccaccaccaccacctcca
aatctagccccgcgcctgtgtccggcacctcctgtttccgctcctcttccggtatctgtt
ccaccacccgttcttccacctgttccagttcctgctccagttcttcctcctactcctgct
ccagttcctcctccggcttctgtggttcagacggtacctccgatgtcctatgctccgccg
gctgtggcgccgcccaaaggcccacctcctccatccgtgacggccaatccggcgcagaaa
agacgcttcacagaggaagtgcccgacgagcgtgacagcggcctgcttggctatcagcat
ggacccattcatatgactaatttaggtgcaggcttctccgcgggcagctccgagactgca
ggacccccaccttcgagttcctctggcccaacgactgagagggacggtacagtgatcccc
cgttcatcccgggagttgcgtgccagacccaccagagatagtaggcagctaatgcctcca
ccgccgttgcccgtaaatggcgtgagacccaagatggaggagagaaggccgccgcaaggc
cccgtggctgaacctgttgcaaagaggctaaaaacgggcttggtggcatacgctggcgac
tcctcagacgaagaggaagagcacccgagctccaaagcctcagggtcaggtaaccccgga
ggctcgccttctacctccttagactggatacaggggtaccgctgcccacccccgccgccc
cctcgggctaaaacgcagccgcagcagcagtctatgcccttctggatggcgccgtga
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