Syngnathus scovelli (Gulf pipefish): 125974968
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Entry
125974968 CDS
T08785
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125974968
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
125974968
NCBI-ProteinID:
XP_049585910
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All DBs
Position
10:12249220..12262758
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AA seq
1025 aa
AA seq
DB search
MPDEAGPCEVRPTFQAMSPGERRRASAALERLRAKLAQKDEWRHHLGRLAALQDTLDSPL
FVHVLALQRTVAHLKEQLSTPPEESGRSVSFSLAPPALEAPLALGAPPSPDSLQRWIVAA
TALPGRAVDLTVARDRPSTDMLPPASLSPLATVNAAERAEVEEIQLLNDGSGLGFGIVGG
KTGGVVVRTLVEGGAADRDGRLRTGDRILRVGATPTDGLGSDEVVQVLQGCGSHVSLRVA
RGQGSRRTKAPPPPDSAPLSVAPMRLLQCRSSGMPNLDGYEIHEVALTKKDGQSLGISII
GHNPLSSQDAVGVFIKHVVPGSAAHHSGNIRVQDRLIALVVGPPQNGRTMTHANGIQLVP
VQMDGVSLHGLTNREIVEVMKRTGRTVLLTLVRKNNAATFQRSPNAVESSCGSLPRSLEF
KTHSTDLDTHSTSSAAELTLKAKWQRTLGPNYQVLVIKLHPVIEDDVQLQSSSKFHPVHT
LRLGVELNSFEGHHYVSCVLPGDPMDKVGVLRPEDELLQVNDTQLCGKSRREVVSFLKEV
PPPFTLVCCRRPPLCEWEGEKKSEGHGCGLKNCHILADDHAMCRKVSPVLSKLKKEQEPG
EVTDQEEERVELALWSSEVEVLELHKEAAGGLGFSILDYQDPLDPGGCVIVIRSLAEGGV
AQRTGALLPGDQLVSVNGVRLEGLSLEQAVRVLKGAPPGAVRLGVCKPLAVSAQYFGQAR
AEEPADFGGTAGHPPTLTSDPEEEGREMAVDQDEAETETASSSSAAAQQTQTEDGQLLGD
ALNPSFTLIHLTGMPSRANSMCDLPTCEPGQHDDTEAEADSEVNGTDAESCGMIDMEKRR
RRSYGGFSITRRVRRGLPEREEGEGEETPRLSHWEPPRRVEVCAKEGESLGLSIVGGHHV
IKQLRNGEELKGIFIKQVLRGSPAHATRALKTGDKILQVSGLDLRSATHQEAVDAIKSAA
SPVVFIVQSLSAKPRIARNALPPLREPPPYRPIGAGATAGPPRPHMKAPPPCAPFAKWTD
RAIGR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccagatgaggccggcccatgtgaagtccggccgacgtttcaagcgatgtcgcccggc
gagcgtcggcgggcgtcggcagccctggagcgtctgcgggccaagctggcccagaaggat
gagtggcggcaccacctgggccgcctggcggcactccaggacacgctggacagtccgctc
tttgtgcacgtgctcgctctgcagcgcaccgtcgcccacctcaaggagcagttgagtacg
ccaccggaggagagcggccgcagcgtcagcttttccctggccccacccgccctggaggcc
ccgcttgcccttggtgccccgccctcgcccgacagcctgcaacggtggatcgtggctgcc
actgcgctgcccggccgcgcggtggacttgacggtcgccagggaccgcccctcaacggac
atgctaccaccagcgtcattgtcgccactggccaccgttaacgccgctgagcgggccgag
gtggaggagatccagctgctcaatgacggttcgggtttgggcttcggtattgtgggcggg
aagaccggcggcgtggtggtccggacactcgtcgagggcggtgccgctgacagggacggg
cgtctacgcacgggagaccgcatccttcgcgtcggggccacgcccaccgacgggcttggc
agcgatgaggtggtccaggtcctgcaggggtgcgggagtcatgtgagcttgcgagttgcc
aggggccagggctctcggagaaccaaagccccgccgccgcctgactctgcccccttgtcg
gttgcgcccatgcggcttcttcagtgccggagcagcgggatgcccaacctggatggctac
gagatccacgaggttgcgctcaccaagaaagacggacaaagcctcggaatctccatcatc
ggacacaaccccctcagcagtcaagatgcggtgggcgtgttcatcaagcacgtggttccg
ggcagcgccgcccatcacagcgggaacataagggttcaagaccgactcattgctctcgtt
gtgggaccgcctcaaaacggccgcacgatgacgcatgcaaacggaattcaacttgtgccc
gttcagatggatggcgtcagcctccacggtctgaccaacagggaaattgtggaggtcatg
aagcggacgggccgcaccgtgctccttacgctggtccgcaagaacaacgccgccaccttc
caaaggtcccccaacgcagtggaatcttcttgtgggtcactgccgaggtcactggagttc
aagactcactctacggatttagatacacacagtacgagcagcgctgctgagctgactctg
aaggccaagtggcagcggactctgggtccaaactatcaagttctggtgatcaagttgcat
cctgtgattgaggacgacgtccagctgcagagctcctccaagttccatcccgtacacacg
cttcgcctgggcgtggagttgaactcattcgaaggccatcactatgtctcctgcgtgctg
cccggagaccccatggacaaagtcggcgttctgagacccgaagatgagctcctccaggtg
aacgacacgcagctttgcggaaagtctcgtcgggaggttgtctccttcctcaaagaggtg
cccccacctttcacgctggtctgctgcagacggccgcctttgtgcgaatgggaaggagaa
aaaaagtcggaaggacacggatgcggcctgaaaaattgtcacattttggcggatgatcat
gcgatgtgccggaaggtgtcgcctgtgctgtccaagctcaagaaggagcaggagccaggt
gaagtcactgaccaagaggaggaacgtgtcgagctggccctgtggtcttctgaggtggag
gtgttggagctccacaaagaggccgccggaggcctgggcttcagcatcctggactatcag
gatcctttggacccaggtggctgcgtgatcgtgatccgctcactggcggagggcggtgtg
gcccagcgcaccggcgcactgcttcccggcgaccagctggtctctgtcaacggcgtccgt
ctggagggcttgagcctggagcaggccgtgcgcgtcctcaagggagcgccccctggcgct
gtgcggctaggcgtgtgcaaacccctcgcggtttcggcccaatactttggccaagcgcga
gcggaggagccggcagactttggcgggactgctggccatccgccaactctgacctctgac
ccagaggaggagggcagagagatggcggtggaccaagacgaggcagagaccgagacggcg
tcgtcatcatcagccgccgctcagcagacgcagacagaagatgggcaacttcttggtgac
gcgcttaatccttctttcactttgatacatttgactgggatgccctcgcgcgcaaactct
atgtgcgacttgcctacgtgtgagccaggccagcacgacgacacagaggcggaggcagac
tcggaagtcaacgggacggacgccgagtcttgtgggatgattgacatggagaagcggagg
aggcggagttatggaggattctccatcaccagaagagtgcgcagggggcttccggagcgc
gaagagggcgagggtgaggaaactcctcggctcagtcactgggaacccccccgcagggtg
gaggtgtgcgccaaggagggcgagtcgctgggcctgagcatcgtgggcggccatcacgtt
atcaagcaactgaggaacggagaagaactgaagggaatcttcatcaagcaggtcctgcgt
ggaagccctgcccacgccacgcgcgccctcaagactggagacaagatcttgcaggtctcg
ggtttggatctccgaagcgccacgcaccaagaggcggtcgacgccatcaaatcagcagcc
agtcccgtggtcttcatcgtccagagtctgtcggcgaagccgcggatagcgagaaacgcc
ctgcctcctctgcgggagccgcccccttacaggcccattggagcaggagccactgccggc
cccccgaggcctcatatgaaagccccgcccccgtgtgccccctttgcaaagtggaccgat
cgagcaatcggacgatga
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