Syngnathus scovelli (Gulf pipefish): 125974978
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Entry
125974978 CDS
T08785
Symbol
grik3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3 isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125974978 (grik3)
04082 Neuroactive ligand signaling
125974978 (grik3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125974978 (grik3)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125974978 (grik3)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
125974978
NCBI-ProteinID:
XP_049585921
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Position
9:complement(483674..530896)
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AA seq
973 aa
AA seq
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MRYTWRFGTTLEYWTWLLACLVWIQYSCGMPHVIRIGGIFEQTDGPVSLVSAEELAFKFA
VNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAVQS
ICNALEVPHVQVRWKHHPMDNRDTFYANLYPDYSSLSYAILDLVQFLKWKTATVVYDDST
GLIRLQELIMAPSRYNIRLKIRQLPVDTQDTRPLLKEMKRSREFRIIFDCSHQMAAQILK
QAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPLVSSIVDKWSTER
QMVPKPDSGLLEGIMTTDAALTYDAVHIVSVSFQNAPQMTVNSLQCHRHKPWRFGGRFMS
FIKESHWDGLTGRLSFNKTTGLRTDFDLDIVSLKEDGLEKVGKWSVSGGLNITEVPKRKG
MNITDSLANRSLVVTTILEEPYVMLKKSDKALVGNDRFEGYCVDLLKELATVLGFVYEIR
LVADGKYGSQDDKGQWNGMIRELIEHRADLAVAPLTITYMREKVVDFTKPFMSMGISILY
RKPNATNNGFFSFLNPMTPDIWIYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDVV
ENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLIVE
RMDSPVESADDIAKQTKIEYGVVRDGATMTFFKKSKVSTFEKMWAFMSSKPSTSLVKSIE
DGIQQVLKSDYALIMESTTIDYVTRHNCNLTQVGGLIDSKGYGIGTPLGSPYRDKISIAI
LNIMEDGRLHMLKEKWWRGNSCLDDERRETGPMGIQNLGGLFIVLASGLVLSVFVAIAEF
VYKLRKTAEREQVFVQRHGGRDQTVVHLREAGETQGAAAGRGEDRCGDQHARLQRPPSPR
KGQPELQRWDDPRLSVSLRSPQGKSLLSNVSGALPETRDNGIDGILRFTMNHSDVGTLTK
HGQLKMAASATQV
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcggtacacttggcgctttgggactactttggaatactggacgtggttgctcgcgtgt
ctcgtgtggattcaatactcgtgcgggatgcctcacgtcatccggatcggcgggattttc
gagcaaaccgacggacccgtgtccctggtcagcgccgaggagctggccttcaaatttgcc
gtcaacaacattaacagaaacaggaccttactgcccaacaccacgttgacctacgacatc
cagaggatcaatatctacgacagcttcgaggcgtccaggaaagcctgcgaccagctgtct
ctgggcgtggtggccatattcgggccgtcgcacagctcgtcgtccaacgccgtgcagtcc
atctgcaacgcgctggaggtgccgcacgtgcaagtgcgatggaagcaccaccccatggac
aacagggacaccttctacgccaacctgtacccggattactcatctctgagctacgccatc
ctggacctggtgcagttcctcaaatggaaaacagccaccgtggtctacgacgacagtacg
ggcctcataagactacaggaactgatcatggcgccgtccaggtacaacatccggctgaag
atccggcagctgcccgtggacacgcaagacaccaggcccctcctcaaggagatgaagagg
agccgcgagttccgcatcatctttgactgcagccaccaaatggccgcgcagatcctcaag
caggctcagaccatggggatgatgacagagtactaccactacatcttcaccactctggat
ctgatggccattgatttggaaccctatcgcttttgcggcgtcaacatgaccgggttccgc
atcctcaacgtggacaaccccctggtctcgtccattgtggacaagtggtcgacagaaagg
cagatggtgcccaaaccggactcgggcctcctggaggggatcatgacgacagacgcggct
ctgacctacgacgccgtccacatcgtgtccgtctccttccaaaacgctccgcagatgacc
gtcaactcgctgcaatgccaccgccacaagccgtggcgcttcggcggtcgctttatgagt
ttcatcaaagagtcccactgggatggactgacagggagactctcgttcaacaagactacc
ggattgcggacagattttgacttggacatcgtaagtctgaaggaggacggactggaaaag
gtcggcaagtggagcgtgtccggaggtctcaacatcacagaagtgcccaagcgaaaaggg
atgaacatcacagattcgctggccaaccgctcgctcgtcgtcaccaccatcctcgaggag
ccatacgtcatgcttaagaagtctgacaaggcgttggtcgggaacgaccgcttcgaaggc
tactgcgtcgacttgcttaaggagctcgccaccgtgctgggctttgtgtacgagatccga
ttggtcgccgacgggaagtacggctcccaggacgacaagggccagtggaacggcatgatc
cgggaactcattgagcatagggccgacttggcggtggctcccctcaccatcacgtacatg
cgagaaaaggtggtggacttcaccaagcccttcatgagcatgggcatcagcatcctgtac
cgcaagcccaacgccaccaacaacggcttcttctccttcctcaaccccatgacgcccgac
atttggatctacatcctgctagcttatctgggcgttagctgcgtgctatttgtcatagcc
aggttcagcccgtacgaatggtacgacgcccacccctgcaacccgggatcagacgtggtg
gagaacaacttcacgttgttgaacagcttctggttcggagtgggctccttgatgcaacaa
ggctccgagctgatgcccaaggccctgtcgacccggatcatcggcggcatctggtggttc
ttcacgctcatcatcatttcgtcctacacggccaacctggcggcgttcctcatcgtggag
cggatggactcgccggtggaatcggccgacgacatcgccaagcagaccaaaatcgaatac
ggcgtggttcgtgacggcgccacgatgactttcttcaagaaatctaaagtttccactttt
gagaaaatgtgggcctttatgagcagcaagccgagcacatctctggtcaagtccatcgag
gacggcatccagcaggtgctcaagtccgattatgcccttattatggagtccaccaccatc
gattacgtcaccaggcacaactgcaacctgacgcaggtggggggccttatcgacagcaaa
ggctacggaatcggaacgccactcggctcgccgtacagggacaaaatctccatcgccatc
ctcaacatcatggaggacggtcgcctacacatgctgaaagagaagtggtggcgcggcaac
agctgcttggacgacgagcgtcgagagacgggccccatggggatacaaaacctgggcggc
ttatttatcgtgctggcgtcgggcctggtgctgtcggtttttgtggccatcgcagagttt
gtctacaaactgaggaagacggcggagcgggagcaggtctttgtgcagcgccatggtgga
cgagatcagactgtcgttcacctgcgagaggcgggtgaaacacaaggcgcagccgccggc
cgcggcgaagaccgatgcggtgatcaacatgcacgtctacaacgaccgccgtctccccgg
aaaggacaacctgagctgcagcgctgggatgacccccgtctttccgtgagcctgcgctca
ccgcagggcaagagcctcctgagcaacgtgtcaggggcgctgcccgaaaccagagacaac
ggcatcgacgggatcctccggttcaccatgaaccacagcgacgtggggacgctgaccaaa
cacgggcaactcaaaatggcggcgtccgccacgcaggtatga
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