KEGG   Syngnathus scovelli (Gulf pipefish): 125974985
Entry
125974985         CDS       T08785                                 
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sscv03019]
    125974985
Messenger RNA biogenesis [BR:sscv03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     125974985
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_4 RuvA_C zf-CCCH_2
Other DBs
NCBI-GeneID: 125974985
NCBI-ProteinID: XP_049585951
LinkDB
Position
9:445079..587188
AA seq 524 aa
MDPTISSLSSGPGEGLELQLRVDFFRKLGYSTAEVDAALSKLGHCADTNATLEELVRIRS
VAPGKDHQEEVKEDRGRASGLVRIEGKKAARSDLRPIVIDGSNVAMSHGNSEVFSCRGIQ
LAVNFFLQRGHTAITVFVPSWRKEKSRPDAAIKDPHILMELERQKRVVFTPSRRVDGKLV
VCYDDRYIVKLAYESDGVIVSNDTYRDLQAENPQWKQCIQERLLMYSFVNDKFMPPDDPL
GRHGPNLDNLLSTKPLASEQKRQLCPYDKKCTYGMKCKYYHPERANRSYLSLADQLREKA
QLSPVKEDIHSPRSMPYLQPPKLNMLDHQWSSHPAQASKNKVIYWEGPSLAPSSGHQEYS
GPSSAHEYLDSGLGSSLSQHSDVYLRNPHRLESAEPRASCGCHGNWDSAGPFSFPAGAAR
KHGAPSAYRSEPFCALPQVPGPLGSPQHHSFGSSCLRRQQHQQQHPACTQQHLDPQRLEL
CKKLQAIFSPQQVATVMHMFPHVTNAEKLAAEIVNQKTPSGMFL
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggacccgaccatctccagcttgagctcaggccccggagagggtctggagctccagctc
cgagtggacttcttccgcaagctgggttactccacggcagaggtcgacgcggcgctgtcc
aagctgggccactgcgccgacaccaacgccacgctggaggagctggttcggatccgcagc
gtcgcacccggcaaagatcaccaagaagaggtcaaggaggatcggggccgagcgtccgga
cttgtcagaattgagggcaagaaggctgcgcggtccgacttgaggcccatcgttattgac
ggcagcaacgttgccatgagtcacggcaacagcgaagtgttctcatgccgaggcatccaa
ctggcagtcaacttcttcctgcagagaggacacacggccattacggtgtttgttccatct
tggcggaaggagaagagccgccccgacgccgccataaaggatccacacatcctgatggag
ctggagaggcagaaacgcgtggtgttcaccccctcgcgccgcgtggacggcaagttggtg
gtgtgctacgacgaccgctacatcgtcaagttggcgtacgagtcggacggcgtgatcgtg
tccaacgacacctaccgcgacctgcaggcggaaaacccccagtggaagcaatgcatccag
gagaggctcctcatgtactcctttgtcaacgacaaattcatgcctccagatgatcctcta
ggccgtcacggtcccaatcttgacaacttactcagtacaaagccactagcgtctgaacaa
aagagacaactgtgtccatatgacaaaaagtgcacttatggcatgaaatgtaagtactac
catccggagcgggccaaccggtcctatctctccttggctgaccaactgagagaaaaagcc
cagttatcgcccgtgaaggaggacatacactcgccacggtcaatgccctacctccaaccg
cccaaactcaacatgttggaccatcagtggtcttctcaccccgctcaggccagcaaaaac
aaagtgatctactgggaaggtccaagtcttgctccgtcttctggacaccaagagtattct
ggacccagttccgctcatgagtacttggactccggcctgggctcctccctaagtcagcac
tctgatgtctacctcagaaacccccacaggctcgaaagcgctgaacccagagcgtcctgc
gggtgccacggaaactgggactctgcgggtccgttctcattcccggctggcgcggcgcgg
aagcacggtgcaccctcggcttaccggtcggaacccttttgtgccttgccccaagttccg
ggcccgctgggctccccgcagcaccacagctttggttcctcctgcttgaggcggcagcag
caccagcagcagcaccccgcctgcacccagcagcacttggacccccaaagactcgaactc
tgcaagaaactgcaggccattttcagccctcaacaggtggctacggtgatgcacatgttc
ccgcacgtgacaaacgccgagaaactggccgccgagatcgtcaatcagaagactccgagt
ggcatgttcctctaa

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