Syngnathus scovelli (Gulf pipefish): 125975051
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Entry
125975051 CDS
T08785
Symbol
ube3d
Name
(RefSeq) E3 ubiquitin-protein ligase E3D isoform X1
KO
K20803
ubiquitin-protein ligase E3 D [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125975051 (ube3d)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125975051 (ube3d)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125975051 (ube3d)
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Gene cluster
GFIT
Motif
Pfam:
HECT_2
DUF4187
Motif
Other DBs
NCBI-GeneID:
125975051
NCBI-ProteinID:
XP_049586085
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Position
9:9147929..9159583
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AA seq
396 aa
AA seq
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MAKYDLEMPVKTRGVGVFLELRKRLQSGLLIIGKDVAGNPADVFVTGGDSSLNIRTPTGK
VTLILPPGVSYLDESCILTPGGESCEEELHFRLRISVSHNTIEESSDIVRTLRTQQTYCF
YCQSCTTRLLEDRLFKRVLPLPNGNWNAIVDDWCCHPDPFANKKMLPQAEDCLVGDTFFL
LTRDGSCDQTLLQEVSPADSQDSQEPKKTCRRLALVSCMSCSSVLGEALTPETLRLYITQ
VVVESSVRDTKPELSLTRSRFLEKTVAARLAELSNSMSSFHFSVQTETGKTFLLLWLLNS
DSIIASVPEWSASTHTHHSPSPKVARALKLLYIACSQMGAQQQDVATSWEVNATGHSVVL
PLKVCEELLQVIEDSNATIPASMRHMRAYKVAYLQL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatacgatttggagatgccagtcaagacacgcggagttggagtgtttctcgaa
ttaaggaaacggcttcagagtggacttctaataatcgggaaagatgttgctggaaacccc
gctgatgtgtttgtgaccggtggagattcctctcttaacattcggacccccacaggcaag
gtgaccttaatattgcccccaggagtctcttatttggatgaatcctgcattctgacacct
gggggagaatcctgtgaagaagagcttcatttcaggctgcgaataagtgtttcacacaac
acaattgaagagtcctcggacatagtcagaacactgcggactcagcagacttattgcttc
tactgtcagagctgtacgaccaggctgctcgaggatagattgtttaagcgcgtgcttcct
ctccctaatggcaactggaacgccattgtggacgattggtgctgccacccagatcctttt
gccaacaaaaagatgctgccccaagctgaggattgtttagtgggcgacaccttctttctc
ctcaccagggatggcagctgtgaccagacccttcttcaggaagtgagccctgctgactcg
caagatagtcaagagccaaaaaaaacctgccgcagactggcacttgtgtcctgcatgagc
tgttcctcagttctgggagaggcactgacaccagagacgctgagattgtacatcacgcag
gtggtggtggagtccagcgtaagggacacaaagccagagttgtcattaaccagatcacgc
ttcctggagaagactgtagcagcaaggcttgcagaactgtctaactcaatgagctccttc
cacttttctgtccaaacagagactggaaaaaccttcctgctgctctggctgctgaacagc
gattccatcatagcatcggtcccagagtggtctgctagcacccacactcatcacagtcca
tcgccaaaggttgcaagagcccttaaactcctctacatagcctgctctcagatgggggct
cagcagcaagacgttgccaccagctgggaggtcaatgccacaggacactctgtggtgctt
cctctgaaggtatgtgaggaacttctgcaagtgattgaagacagcaatgcaacaattcct
gcatcaatgcgtcacatgagagcctataaggtggcttacctacaattgtga
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