Syngnathus scovelli (Gulf pipefish): 125975084
Help
Entry
125975084 CDS
T08785
Symbol
pals2a
Name
(RefSeq) MAGUK p55 subfamily member 6a isoform X1
KO
K24048
MAGUK p55 subfamily member 2/6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125975084 (pals2a)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
PDZ domain-containing proteins
MAGUK family proteins
125975084 (pals2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
SH3_2
SH3_1
PDZ
PDZ_2
PDZ_6
SH3_9
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
125975084
NCBI-ProteinID:
XP_049586170
LinkDB
All DBs
Position
9:3977604..3984264
Genome browser
AA seq
552 aa
AA seq
DB search
MTVANAKSGSAMQQVLDNLKDLPTSSLAKDIDLIFLRGIMESRVVRSLAKAHERLEEVKL
EAVRDDNIQLISDILDSLNKLSVKDAATVELTRILQGPHFMSLIEAHDQVAAKSYEMPNA
AVNCTATLASCLVPADAIRMIGIQKKAGEPLGVTFRVEQGEMVVARILHDSSIDRQGMLH
TGDIIREVNGHQVGGDPHQLQELLRDCSGSVTLKVLPSYKDSPTLPQVYLKSHFNYNPAS
DNLIPCREAGLAFSKGDILHVVNKDDPNWWQARSVVGGATGLIPSQFLEEKRKAFVRKEG
HLSAKGMLCGSLMGKKKKKKKMYLMAKNAEFDRYELQIYEEVAKMPPFQRKTLVLIGAQG
VGRRSLKNRLIVLNPLRYGTTVPFTSRSPREEERDGQNYSFVTRHQMEQDIKDSRFLEHG
EYDGNLYGTKIDSIHQVVAAGRTCILDVNPQALKVLKTAEFMPFVVFIAAPELDTLRNMH
KAVVDAGLTTKLLTESDLKKTVEESAKIRRAYSHFFDLVIYNDNLDKAFDQLQEAVERLL
VEPQWVPVSWVY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggctaatgcaaaatcaggctcagccatgcagcaggtcctggataacctgaaa
gacctgcccacaagctcgctcgccaaagacatcgacctcatcttcctccgcggcatcatg
gagagccgcgtcgtccgctcccttgcaaaggcccacgagcgtctcgaggaggtcaagtta
gaagcggtccgagatgacaacattcagctgatctctgacatcctggactctctcaacaag
ctgagtgtaaaagacgctgccaccgtggagctcacccgaatccttcaggggcctcatttt
atgtctttgatagaggctcatgaccaagtggctgcaaagtcctacgagatgcccaacgcc
gctgtaaactgcaccgccaccttggctagctgtctcgtgcccgccgacgccatcaggatg
atcggcatccagaagaaagccggagaaccgctgggggtgaccttccgcgtggagcaagga
gaaatggtggtggcgcggatcttgcacgacagctccatcgaccgccagggcatgctgcac
acgggcgacatcatccgcgaggtgaacggccaccaggtgggcggcgacccgcaccagctg
caggagctgctgagggactgcagtggcagcgtcaccctcaaggtgctgccaagctataag
gactcgccaacccttccacaggtttacctgaagtcccatttcaactataacccggcctca
gacaacctgattccttgtagagaggcgggccttgccttctccaagggagacatccttcac
gttgtgaacaaggacgacccgaactggtggcaggcacgcagcgttgtagggggagcaact
ggcctcatcccaagtcagttcttagaggagaagaggaaagcttttgtgaggaaagaaggg
catctgtcggctaaagggatgctttgtggaagcctcatggggaaaaagaagaagaagaaa
aaaatgtatctgatggcgaagaatgcggaatttgaccgctacgaactgcagatctacgag
gaggtcgccaagatgccccccttccagaggaaaacgctggttctgatcggtgcacagggt
gttgggaggcggagcctgaaaaacagactcatcgttctgaatcctctgcgatatggaacc
actgtgcccttcacatcgcgcagcccccgagaagaagagcgagacggccagaactactcg
ttcgtgacgcggcatcagatggagcaggacatcaaggacagccgcttcctggagcacggc
gagtacgacggtaacctctacggcaccaagatcgactccatccatcaagtggtggcggcc
ggccgcacctgcatcctggacgtcaacccgcaggctttgaaagtgctaaagactgctgag
ttcatgccttttgtggtcttcatcgccgctcctgagctggacactttgagaaatatgcac
aaagctgttgtggatgccggactgacaactaaactacttactgagagcgatttgaagaaa
acagtggaggagagcgccaagatccgccgagcctacagccacttttttgacttggtcatc
tacaacgacaacttggacaaggccttcgaccaattgcaggaggcggtcgagagactattg
gtggaaccgcagtgggtcccggtcagctgggtctactga
DBGET
integrated database retrieval system
