Syngnathus scovelli (Gulf pipefish): 125975125
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Entry
125975125 CDS
T08785
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125975125 (prdm13)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125975125 (prdm13)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
ADK_lid
zf-C2H2_15
zf-BED
Zf-C2H2_ZNF451
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
125975125
NCBI-ProteinID:
XP_049586239
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All DBs
Position
9:9001522..9008058
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AA seq
633 aa
AA seq
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MVLISPHAMQATRASTTVSVVSDCGIPAGLRIGPVPGIFKLGKYLSDRKEVGPKKKIRLV
REECVDESGCPVSDWIGYIRAARNTQEQNLEAVSDLPGGQIFYRVMREIPAGEELSVWYS
NALAQWYDMPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRGFVNSE
QARGTENFSRSPKSGDIPNTSCSPRSSQSISSISDSSRRSLTSPFLGKAGLVKKSSSEEQ
DRALDMSVTSSRNQGHMLGLGAASSMLSSMGFHPGVRSAFKPTGVAKVPVVDAHREDASS
KMGAFGKVIGNMKPMRNMVGETLNGSGNPAAKCAPGIGDAPSMVPCSNTIRGFPLLPHIE
ETSAFKHVESRVHAGLSPSRYPHMHPGLHFERFSLPNFDGVKTYGGDCNIPLMPFTVYNG
EFLYSSPYYPLKFHFSNLLKYPESMPYFGAPSLSQDMQGTITNIDREIAMHTQQLSEIAN
EKNRTRLDPLPAGSTSNSNSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVC
FRPFGDPSNLNKHIRLHAEGNTPYRCDFCGKVLVRRRDLERHVKSRHPGQSVKKLEDKAG
LFDDAELKSDNDSDVDVCFTDDQSEPESSKNND
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatctcaccccacgccatgcaagccacccgggcgtccaccactgtcagtgtg
gtttcagactgtggaatcccggccgggctccgaataggtccggtccctggcatctttaaa
ttggggaagtacctgtcggaccgcaaagaagttgggccaaagaaaaagatccgtttagtg
cgtgaagagtgtgtggatgagtccggctgtcccgtgtcagactggatcggatacatccga
gccgccagaaacacgcaagaacaaaatctagaggctgtgtctgacctacctggtggacag
atattttaccgcgtgatgagagaaattcctgcaggagaagaactcagtgtttggtattca
aacgctttggcccaatggtacgacatgcccacgacggccacccctacgcacgacgagaaa
ggtgaagagcgctacatctgttggtactgctggagaatctttaaataccccaacacactc
aaagcccacgtgcacttccactgcgcgctgagcaatgggcgcgggttcgtgaacagcgag
caagccagaggcacggagaacttcagcagatctccaaagtctggagacatccctaacacg
tcttgctcacccaggagctctcagagcatctcctccatctccgactccagcaggaggtca
ctgacctcgcctttcttgggcaaggccggactggtgaaaaagagtagctcagaggagcag
gacagagccctggacatgagcgtcacttcatcgcggaaccaaggacacatgctcggcctt
ggcgcagcatcctcgatgctgagttctatgggcttccacccgggtgtccgctccgcattc
aaaccaacaggcgtcgcgaaggtcccagtggttgacgcgcatcgagaggatgccagctcc
aagatgggtgccttcggcaaagtcatcgggaacatgaaaccgatgcgaaacatggtgggc
gagacgttaaacggaagcgggaatcccgcagcaaagtgtgccccaggtataggtgacgct
ccaagtatggtgccatgttccaacaccatcagaggcttcccgttgctccctcatatagag
gaaacgtcggctttcaaacatgttgaaagccgagtgcatgccgggctgtccccctcccgg
tacccgcacatgcacccgggactccactttgaaaggttctctctgcccaacttcgacggt
gtcaagacttacggtggcgactgtaacatccccctgatgcccttcactgtttacaacgga
gagtttctgtacagttcgccatattaccctcttaaattccacttcagcaatctcctcaag
tacccagagtccatgccctactttggcgcaccttctctcagtcaagacatgcagggcaca
atcaccaacattgatcgggagatagctatgcacacgcaacagctgtctgaaattgccaat
gagaagaaccggaccagactggaccccttgcccgcaggcagcaccagcaactccaactcc
ggcaaaccaaaaaagggacacttatgtctgtactgtggcaaactgtactccaggaaatat
ggcctgaaaatccatatgaggactcacaccggctacaagccgctcaagtgcaaagtgtgc
ttcaggcccttcggtgaccccagcaacctgaacaagcatattcggctccatgcggagggc
aacaccccctacaggtgcgacttctgcggcaaagttctagtccggaggagagatttggag
agacacgtcaagtccagacatcccggtcagagcgtcaagaagctggaagacaaggcgggc
ctgttcgatgatgccgagctgaagagcgacaatgacagcgacgtggacgtctgctttact
gacgaccaaagtgagcctgaatccagcaagaataatgactga
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