Syngnathus scovelli (Gulf pipefish): 125975166
Help
Entry
125975166 CDS
T08785
Name
(RefSeq) ATPase family AAA domain-containing protein 2 isoform X1
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125975166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
ATAD2_C
Bromodomain
AAA_lid_3
AAA_22
AAA_16
AAA_2
NPHP3_N
AAA_7
nSTAND3
IstB_IS21
AAA_5
SLFN-g3_helicase
RuvB_N
RNA_helicase
AAA_28
ResIII
Mg_chelatase
AAA_14
TIP49
AAA_25
Parvo_NS1
AAA_18
Motif
Other DBs
NCBI-GeneID:
125975166
NCBI-ProteinID:
XP_049586329
LinkDB
All DBs
Position
9:633339..641977
Genome browser
AA seq
1410 aa
AA seq
DB search
MGMLRGSGGGGVQPVATTPNRRSMELDTSSEFLSLVPASQRNNPRSTRTCRAREDHLGSP
EHNRGDDEQQSGSCLHDFPKTRGQRVKLGVSFSDMQPKAGGYATRKSSRLQKEGKSSCDK
VQGDVPDEVEGTSTPKRSRINLRSPDNEVEHSLRRSSRITQYKLNSRNQSVLYDRLITNT
AEAVLQKMDDMKKLRRRLNNEEQLGVYTRGRVRRSQKTKVDIKDAKENQDDHDDEDEDED
EDDDDDDDVDDLDDDIDDDEDAGDEDNQRRYEFRQRKNVVLYQAPQDEPREARESRVSRK
RPMYFKEHSSPSRRRFPFGSVAPQNPYNRRSARMRHTLRSSESTSTSSEDEAFQRARPNS
KTKSGSRSVTSLPVNIVKDDLLGIHKDRTKTGASLIDPMHIDRTVRFGNIGGLSRHISSL
KEMVVFPLLYPEVFERFHIQPPRGCLFYGPPGTGKTLVARALANECSQGERKVSFFMRKG
ADCLSKWVGESERQLRHLFEQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL
MDGLDGRGEIVVIGATNRIDSIDPALRRPGRFDREFFFSLPDREARRDILKIHTRQWTPP
LSDNFLDELADECVGYCGADIKAVCSEAALCALRRRYPQIYSSSQKLVLDVNSIAITAKD
FMSAMTKMVPAAQRTVVSPAKALLPAIRPLLSAALQEILHTVSKVFPHAEQGLKRKRTQD
HSSVSEDDLVFSDDDERPDGQSPQKASKGILSIERNALSQPTSHRPRLLLEGRTGSGQTA
HLAPAVLHSLERFTVHTLDMAVLFGASSTAPEETCAQIFVEAKRTSPSVLYIPHIGQWWE
TVGCSLKATFLSLLGSLPAFAPILLLATCSLEYSELSYEVQELFKADYGEVYYVLVPSKR
ERRHFFEDLILNQAAKAPASKRKSPAHSLEVLPVAPPPPPRQLVEQEAQKLAEQEEDTLR
ELRLFLRDVTNRLSHDKRFKAFTKPVDLEEVPDYAAVIEKPMDLSTVLSNIDLHQYVTVK
DFLQDVDLIWKNALEYNPDTNPSGRQIRHKACALKDTVHAIIRHELDENFEKICDEIKDS
RISRGLSTTPSFSHALSKQAKLVTEANKPTEKTPPKEPFKAATASIPSTTSSTSIPPKST
VQRKKRRKSRWSSGYYSKKASSSSHVFKDNSRLSSEDDEDAEDTETEKVLSPELFDEDSK
EVKAALRASLKDAIQSESEKRDVDHLTRNHIVAKDQSDFEVTPQNPVSIRHSSVSGEGHN
QGRLYTGCGQACSQSQSQSKIAAHEPEPMEVVSADGASTEHSGALAGDLKDSVAERSMTC
MTWPSKNSVQQQFDMEKALQSRDREKPSLVVDRDKLKELLDKVVMKTDGYEVHKLEKLYA
LLCQSVYRHRRDHHKAALTMELEQKINDFY
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgctacgcggcagcggcggcggcggtgttcaaccggtggcaacaactccaaac
aggaggtcgatggagttggacacaagctcggagtttctgtctctcgttcccgcttcgcag
agaaacaacccccggtcgacacgaacctgccgcgctcgagaagatcacctgggcagcccc
gaacacaatcgaggagatgacgagcagcagtcgggaagctgtctccacgactttcccaag
accagaggccaacgagtcaaactaggggtctcctttagtgacatgcaaccaaaggctgga
ggctatgccaccaggaaatcctccagactgcagaaggaaggaaaatcatcctgcgacaaa
gtgcaaggggatgttccagacgaggtagaagggacttccacgcccaaaagaagccgcatc
aacctcaggagccccgacaacgaggtggaacactcgttacgacgaagttccagaatcacc
caatataaattgaattcccggaatcagtctgtcctttatgaccgcctcatcaccaacacg
gcagaggctgtcctgcaaaagatggatgacatgaagaagttgcgacgcagattgaacaat
gaagaacagctgggtgtatacaccagaggcagagtgaggcgatcgcagaagaccaaagtg
gacatcaaggatgccaaggaaaaccaagatgatcatgacgatgaggacgaagatgaagac
gaggatgacgacgacgacgatgacgtcgatgacctcgacgacgacattgacgacgacgag
gacgccggtgacgaagacaaccagaggcgctacgaattccgacagcgaaaaaatgtcgtt
ctctaccaggcgccgcaagatgagcccagagaagctcgagagagccgagtgagcagaaag
cgccccatgtactttaaggagcactcgtcccccagcagacgcagatttccctttggctcc
gtggcccctcagaatccctacaacaggaggagcgccaggatgagacacaccctccgtagt
agtgagtccacgtcgacttcttcagaagatgaggcttttcaaagggccaggccgaatagc
aaaactaagagcgggagccggtcggtcaccagtctacccgtgaacattgtgaaagatgac
ttgctgggaattcacaaagatcgcacgaaaactggagcaagtctcattgaccccatgcac
atagacagaacggtgcgctttggcaatatcggaggcttgagcagacacatctcatccctg
aaagagatggtggtgttccccctgctttacccagaagtctttgagaggttccacatccag
ccacccaggggttgtttgttttatggtcccccaggcactggcaaaacgctggtggctcga
gccttggccaatgaatgcagtcagggagaacgaaaggtgtccttctttatgaggaagggg
gccgattgcctcagtaaatgggtcggagagtccgagagacagctccgccatctctttgag
caggcataccaaatgcgcccatcgatcattttctttgatgaaatcgacggtctggctccg
gtcaggtccagtcgacaggatcagattcacagttccatcgtgtcaactcttctggctctc
atggacggactggatggcagaggagagattgtagtgatcggcgccaccaacagaatcgac
tccattgatccggcgctcagacgcccgggccgcttcgaccgagagtttttctttagcctg
cccgacagagaggcaagaagagacattttgaagatccataccagacagtggacacctcct
ctttctgacaatttcttggacgagttggccgatgaatgtgttggttattgcggcgctgac
attaaggccgtgtgttcggaggcggcgctgtgcgcattacggcgccgctatccgcaaatt
tattcctcatcccagaaacttgtgcttgacgtgaattccatcgcaatcacagccaaagac
ttcatgtccgccatgaccaagatggtgccggctgcacagaggactgtagtgtccccagcc
aaggctctgctgcctgcaatccgtcccttactgagcgccgctctgcaggagatcctccac
accgtcagcaaagtcttcccacatgccgagcagggcttgaaaaggaagaggacgcaagat
cactcgagcgtgtccgaggacgacctggtgttcagcgacgacgacgagcggcccgacggg
cagagccctcaaaaggcctcaaagggaattctcagcatcgaaagaaacgcgttgagccag
cccacctctcaccgtcccaggctccttttggagggtcgaacgggctcgggtcaaacggct
cacctggctcccgccgttctccattctcttgaaagattcacagtgcacactttagacatg
gcggtgctgtttggagccagttccacggcaccagaggagacctgtgcacagatttttgtt
gaagccaagcggacctcccccagtgtcctgtacatcccccacattggacagtggtgggag
acagtgggttgttcattaaaagccacttttctcagcctccttggctccctccctgccttc
gctcccatactgctactggcaacctgcagtctcgagtactctgaactcagttatgaggtt
caggaattgtttaaggctgattatggggaggtttattacgtgctagtccccagcaaacgg
gagaggagacatttctttgaagacctaatactcaatcaggccgccaaagctcctgcctca
aaaaggaagtcaccagcccactccttggaggtgcttcctgttgctcctcctccgccgcca
cgtcagctggtggagcaggaagcccaaaaactggctgaacaagaggaagacaccctgagg
gagctccgcctctttttgcgggacgtcacaaatcgcctctcccatgataaacgcttcaaa
gcttttacaaagcctgtggatctagaggaggttcctgattatgctgctgtgatagagaag
cctatggacctgtcaaccgtgctttcaaatattgacctccatcaatatgtaacggtcaaa
gactttcttcaagatgtggatctcatttggaagaatgcgcttgaatacaacccggacacc
aacccctcaggccgccagattcgacataaggcctgtgcgcttaaagacacggtgcatgcc
atcatacgacatgaattggatgaaaactttgagaagatttgtgatgaaatcaaagattca
cgcatcagtagaggcttgtcgacgacaccttccttttcccatgccctctccaagcaggcc
aaacttgtgactgaggctaataagccaactgagaagacgccaccaaaagagccgtttaaa
gccgcaaccgcatcgattccgagtacaacttcctcgacgtccattcctcctaaaagcaca
gtgcagagaaagaaacggcggaagagtcgctggtcctcgggctactattcaaagaaggca
tcttcctcttctcacgtctttaaagacaatagtcgcttaagcagcgaagacgacgaagat
gccgaagacaccgagacggagaaagtgctgagcccggagctttttgacgaagacagcaag
gaggtcaaagcggcgcttcgagcttctttgaaggacgctattcagagtgaaagtgaaaaa
agggatgttgaccacctgacacgaaaccatatcgtagccaaagatcagtcggattttgaa
gttacgccacaaaacccagtcagtattaggcacagttccgtgagcggtgaaggacataac
cagggacgcttgtacacaggttgcggccaagcctgcagccaaagccagagccaaagcaag
attgcagcacatgagccggaaccaatggaggtggttagcgcagacggtgccagcacagag
cactctggagccctcgcaggagatctcaaggactcggtcgcagagagaagcatgacgtgc
atgacttggccctccaagaactctgttcagcagcagtttgatatggaaaaggcattgcag
agccgtgaccgggaaaaaccttcactggtggtggacagggacaaattaaaggagctattg
gacaaagttgtgatgaagactgatggctatgaggtgcacaagttggagaaactctatgct
ctcctctgccaaagtgtctacagacacagaagagaccatcataaagctgcattaacaatg
gagttggagcaaaaaatcaatgatttctactga
DBGET
integrated database retrieval system
