Syngnathus scovelli (Gulf pipefish): 125975168
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Entry
125975168 CDS
T08785
Name
(RefSeq) zinc fingers and homeoboxes protein 1
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125975168
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125975168
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
HTH_71
Motif
Other DBs
NCBI-GeneID:
125975168
NCBI-ProteinID:
XP_049586332
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Position
9:642171..651161
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AA seq
923 aa
AA seq
DB search
MSSRRKSTTPCMVLPSDQLEATTERTMEVEAEGVEGAVDEAQTAVELDQTLAVGPTPLDA
GESDSLEDKEAPAATEQPGEDQQCDMLRDVATDAGNVGAISLSKTPIMRMKTKSEPKRIA
VSLKASDEAVEYLEAEGEVEAEQQPQPQQQPQQPQQQPIQAPLGPMASVEMLLHDSMKLG
AGNFLVSQAFEQPRKSSILNPAVIPPGLAQVLSAFQAQQNPSAQPQLLIPLSSIPSYSAA
LDINPLLGSTYKKFPYPSMAEISNLAGQTQFTEEQIKVWFSAQRLKHGVSWTPEEVEEAR
RKQFNGTVHTVPQTITVIPAHQLSAANGLQSILQTCQIVGGQPGLVFTQVAPGGNVPVTN
PITLTVAGLPSQSQSASRLSCQSTPTNCELKRATTVQPPSLSPQENSALSADSFSMRPKK
SKEQLAELKASYLKNHFVSDAEIARLMKITNLTKGEIKKWFSDTRYNQRNSKNSNVIVFH
DGGGRASGGGGGGCSAATIVIDSSDETPASPHPPCTPPVKEKETRPKTWNPFPDFTLQKF
KEKTPEQLVVLEESFEKSSTPSDDELSRLRTETKLTRREIDAWFTERRKMPTFGAPSPGS
SEAERMDAAAGGRAGEVTAASRAASSSSRKGGSQTPPGGRGKQTATGSCNNGGGGKDIKD
KTKKTPEQLHILKSAFVRTQWPTTEEYDQLVEESGLPRPYIVSWFGDSRYSWKNGNLKWF
FQYQSGNVEGGGGGGSGGGSGGGSGGGSGGGGQKAGGGRKRRVRNRGWGRSRPRKQPRRS
ASFGSDSDRCPPPKKFKSGRDILKEYYLKHRFLNEQDLDELVTKTNMSYERVREWFAEVQ
RRLDVGADPFQEPPSATPDAREGAHEIRGEASQADKTPRGDRMGNEEEEDDDDDEEHDEE
DTDDSEVWEPSRSVRKSLSVSED
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgccgaaagtcgaccacgccttgcatggtgctaccctctgaccagttggag
gccacaactgaaaggacaatggaagtagaggctgaaggggtggagggggcggtagatgag
gctcaaacagcagtggagctggatcaaacactagccgttggccccacaccactagatgct
ggcgagtccgacagcctggaagacaaagaggccccggccgcgaccgagcagcccggcgag
gatcagcagtgcgacatgctccgagatgtcgcaacagacgctggcaatgtcggcgccatc
tcgctaagcaagacccccatcatgaggatgaagaccaaatctgagcccaagaggattgcc
gtgtccctcaaagcttcagatgaagccgtggagtacttagaagcagagggcgaggtggaa
gcggagcagcagccgcagccgcagcagcagccacagcagccacagcagcagcccatccaa
gcgcctctgggaccaatggcgtccgttgagatgctgctccatgactccatgaagctcggc
gcgggaaacttcctggtcagccaagccttcgagcagccaaggaagtcatccattttaaat
cccgccgttattcctcctggcctggcacaggtactttctgctttccaggcccagcaaaat
ccatcagctcaaccccaattgctaattcctctcagcagcattccctcttatagtgcagct
ttggacatcaaccctctgctggggagcacttacaagaagtttccctatccctccatggct
gagatcagcaatctggccgggcagacgcagttcacagaagagcaaattaaggtgtggttc
tcagcccagcgactcaagcatggtgtcagctggaccccggaggaagtggaggaggccagg
aggaaacaattcaacggcactgtccacacggttcctcagaccatcactgtcatacctgct
caccagctgtctgctgccaatggcctgcaatccatactgcagacctgtcagattgtgggg
gggcagcctggcttggtgttcacgcaggtcgctccaggagggaatgttcccgtgaccaat
cccatcacactgacggtggcgggattgcccagccagtcccagagcgccagcagactttcc
tgccagtccaccccaacaaactgtgagctgaaacgggctaccactgtacagccgccctca
ctttccccacaggagaactctgccctgagcgccgacagcttcagtatgcgccccaaaaag
tccaaagagcagctggccgagttgaaagccagctacctgaaaaaccactttgtcagcgat
gccgaaattgcccgtttgatgaagatcaccaatttaaccaagggggagatcaaaaaatgg
ttcagcgacaccaggtataaccagcgcaactccaagaacagcaatgtcatcgtattccac
gacggaggcggcagagcgagcggcggcggcggcggcggctgtagcgccgccaccatcgtc
atcgactccagcgatgaaacgccggcatcacctcaccctccgtgcacgcctcccgttaag
gagaaggagacccggcccaagacgtggaatcccttcccggacttcactctgcagaagttt
aaggagaagacaccggagcagttggtggtgctggaggagagctttgagaagagcagcacg
ccgtccgacgacgagctgagtcgcctgagaaccgagaccaaactgacacggagggagatc
gacgcctggttcaccgaaagacgcaaaatgcccaccttcggcgctccgtccccggggtcc
tctgaggcggaacggatggacgccgccgccggaggcagagctggagaagtcaccgctgct
tctcgcgccgcctcctcctcctctcgtaaaggagggagtcaaacgccacccggaggccgc
ggtaaacagacggcgaccggcagctgcaacaacggcggcggcggcaaagacatcaaggat
aagaccaaaaagactccggagcagctccacattttgaaaagtgccttcgtgcggactcag
tggcccaccacagaagagtacgaccagctggtggaggagagcggcctcccccgaccctac
attgtcagctggttcggggactcgcgctactcctggaagaacggcaaccttaaatggttc
tttcagtatcaaagcggcaacgtggaaggcggcggcggtggcggcagcggtggcggcagc
ggtggcggcagcggcggcggcagcggcggcggaggtcaaaaagcgggaggcggccgaaaa
agacgcgtccgaaatcgcggttgggggagatctcgacctcgaaagcagcccaggcgctcg
gcgtcctttggttccgactcggacagatgccccccgcccaagaaattcaagagcggcagg
gacatcttgaaggagtactacctgaaacaccgcttcctcaacgagcaggacctggacgag
ctcgtcaccaagaccaacatgagctatgaacgggtgcgagaatggtttgcggaggtccag
agacgtctggacgtgggcgccgaccccttccaggagccaccttcggccacgccggacgca
agagagggggcccacgaaataaggggagaggcgtcacaagccgacaagacgccgagaggc
gacagaatgggaaacgaagaggaggaggacgacgacgatgacgaagagcacgatgaggag
gatacggacgacagtgaggtttgggagccgtcacgcagcgtgaggaaatccttgtctgta
tccgaagactga
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