Syngnathus scovelli (Gulf pipefish): 125975193
Help
Entry
125975193 CDS
T08785
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125975193 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125975193 (washc5)
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Others
WASH complex
125975193 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RSF
DUF3106
Motif
Other DBs
NCBI-GeneID:
125975193
NCBI-ProteinID:
XP_049586374
LinkDB
All DBs
Position
9:145218..152905
Genome browser
AA seq
1158 aa
AA seq
DB search
MDFLAENNLCGQAILRIVSRGNAIIAELLRLSDFIPAVFRLKDKSDQQKYGDIICDFSYF
KGPEYYEGKLEAKPDLQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLHEGVY
IQQTLETVLLNEDGKQLLCEALYLYGVMLLVIEHKIEGDVRERMLVSYYRYSAARSSADS
NMDDICKLLRSTGFSSQPGARRPANYPESYFHRVPISATFISMVIGRLRSDDIYNQVSAY
PLPEHRSTALANQAAMLYVCLYFSPSILQSQQAKMREIVDKYFPDNWVISIYMGITVNLV
EAWDPYKAAKTALNYTLDTANIKEQASRYGTSMESLRPQVQQLLKEGFLRDEIILDNIPK
LLNCLRDCNVAIRWLMLHSAESAYDPNNKKLRQIKEQVLADSKYNSKSLFQLLLDAAQLE
FTLKEMFKQMLSEKQIKWESYKKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREISK
QIQSLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINIK
EEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVSSSMVTKLRATFLKLASALDLPLLRIN
QVNSADLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDKL
KDYSQLGARYEVAKLTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAYA
LHKGLIFNPKAKPSELMPKLKDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINYN
VEQECNSFLRAKIQDWQSVYQSTHIPIPKFPSVDESATFIGRLCREILRITDPKLTCYIE
QMNTWYDLKSHQEVTNNRLFSGIQSSLGTFGLNGLDRLLCFMIVKELQNFLTMIQKTILK
DKAAVEVLKAVLIAVNPVQGVVGNASKVYGGAVAKIPKIWGPYLEVIMKVGQMQILRQQI
ANELNYSCKFDSKHLAAALQNINKSLLADIEAHYQDPSLPYPKEDNTLLYEITAYLEAAG
IHNPLNKIYITTKRLPFFPILNFLFVIAQLPKLQYSRNQGMTCRKSTDPVDWPPLVLGLL
TLLKQFHSRYTDQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVKYTKLSRK
VAEAHVPSFIFDEFRTIL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggacttcttggcggagaacaacctgtgtggccaggccatcctcaggatagtttccagg
ggaaatgctatcattgctgagcttctacgcctctctgactttatccctgcggttttcaga
ctcaaggacaagagcgatcagcagaaatatggagacatcatctgtgacttcagctacttt
aagggccccgagtattacgagggaaagttagaggccaaacctgaccttcaggacctggat
gaagagttcagggaaaacaatattgagattctctcccgattctatctggctttcgagagc
gtccacaaatacatcgtggatctaaatagatacttggatgacctccatgagggggtttat
atacagcaaacacttgagactgtgcttctaaatgaggatggaaagcaactactgtgtgag
gcactctacctgtacggtgttatgttgctggttatcgagcataaaattgaaggggacgtt
cgcgaacggatgctggtctcctactacagatacagcgcggcaaggtcttcggctgactcc
aacatggacgacatctgcaagctcctgcgcagcaccggcttctccagccagcctggagcc
cgacggcctgccaactatccagagagctactttcacagggttcccatcagtgccacattc
atcagtatggtcattggaagactgcgctctgacgacatctacaaccaagtgtccgcctac
cctctacctgaacatcgtagtacggcgctggctaatcaggcggccatgctgtacgtctgc
ctttacttcagcccgtccatactgcaaagccagcaggccaagatgagagagatcgtggac
aagtacttccctgacaactgggtgatcagtatctacatggggatcaccgtcaatctggtg
gaggcttgggacccgtacaaagctgctaaaactgctctcaactacacgctggatactgcc
aacatcaaagagcaggccagccgttacggcacgagcatggagagccttcggccgcaggtg
caacagctgctgaaggaaggcttcctcagagacgagatcattctggataacattcccaaa
ttgcttaactgcctaagggactgcaatgttgccattcgctggctgatgctgcattcggcc
gagtcggcgtatgacccaaacaacaagaaactacggcagatcaaagagcaagtgctggct
gactccaaatacaattccaagagcctctttcagctcctcctcgatgcggcccagctggag
tttaccctcaaggagatgttcaagcagatgctgtcagagaaacagatcaaatgggagagc
tacaagaaggagggctccgagagaatgaccgaactggccgaagtcttctctggcgttaaa
ccgctcaccagggtggaaaagaacgaaaacctccaagcttggttccgagaaatctcgaaa
cagatccagtcgttgaactatgaggactcgacagctgccggtaggaagacggtccaactc
atacaggctcttgttgaggtgcaggagttccaccagttagagtccaacctgcaggtgtgt
cagtttctggcagacaccagaaagttcctgcaccaaatgattcgcaccatcaatatcaag
gaagaggtcctcatcacaatgcagatcgtgggagacttgtcgtacgcttggcagatcatc
gacagcttcacaagcattatgcaggagagcatccgagtcagttcctccatggtcactaaa
ctgcgagcgacctttctgaagctggcttccgctttggatcttccgttgctgcggatcaac
caagtcaacagcgctgacctgctgagtgtttcccagttctactcgggagaattggtggcc
tatgtcagaaaggtactgcagatcatcccagagagcatgttcacctctctggccaagatc
attaagcttcagatccacgacatcatggaggtgcccacgcgactggacaaggacaaactg
aaggactactcccagctgggggcacgctatgaagtggccaaactcacccatgacatctcc
attttcactgagggcatcttgatgatgaagaccactttagttggaattatcaaggtggat
cctaagcagcttctggaagatggcatcaggaaggagctggtgaagagggtggcttatgcg
ctgcacaagggcctgattttcaatcccaaggcgaagccgagcgagttgatgcccaagtta
aaagacatggcagccaccatggacggattctacaggtcctttgagtacatccaggactac
gtcagcatatacggtctgaaaatctggcaggaggaagtgtctcgaatcatcaattacaac
gtagaacaagagtgcaacagtttcctcagggctaagatccaggactggcagagcgtgtac
cagtccactcatatccccatcccgaagttcccatccgtggatgagtcggccaccttcatt
ggacgtctctgtcgagagattctccgcatcacagatcccaagctgacgtgctacattgag
caaatgaacacctggtacgacctgaagagccaccaggaagtgaccaacaacaggctgttc
tcagggatccagagctccttggggacatttggcctcaatggcctggaccgcttgctgtgc
ttcatgattgtcaaggagctgcagaatttcctgacaatgattcagaagaccattttgaag
gacaaagctgcagtagaggtcttgaaagccgtgctgattgctgtcaatccggttcagggc
gttgtaggtaatgccagcaaagtgtacggcggcgctgtcgccaaaatccccaaaatctgg
gggccgtatttagaggtcatcatgaaggttggtcaaatgcaaattcttcggcagcaaatt
gccaatgagttgaactactcctgcaagtttgactccaaacacctggcggctgccctgcaa
aacattaacaagtcgctgctagcagacattgaagcccactaccaggacccgtcgctgccc
tacccgaaagaggacaacactctcttgtacgagatcacagcctatttagaggctgccggt
attcacaacccacttaataagatctacatcaccacaaagcgccttcctttctttcccatc
ctcaacttcctgtttgtgatagcgcagctgcctaaacttcagtacagcagaaaccaagga
atgacatgcaggaaatccaccgacccagtggactggcctcctttagtcctcggccttctc
acgctcctcaagcagtttcactccagatacacagaccagttcttggctctcattgggcag
ttcatccgctctatcatggagcaatgtacaagtcagaagatccctgacatgccctctgat
gtggtgggagcgctcatgttcctggaagactatgtcaaatatactaaattgtcgcgcaag
gtggctgaagcccacgtccccagtttcatttttgatgaattcagaactatactgtga
DBGET
integrated database retrieval system
