Syngnathus scovelli (Gulf pipefish): 125975197
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Entry
125975197 CDS
T08785
Name
(RefSeq) protein LRATD2
KO
K22810
protein FAM84B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125975197
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125975197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRAT
NLPC_P60
SH3_CYT4
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125975197
NCBI-ProteinID:
XP_049586382
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All DBs
Position
9:156728..159066
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AA seq
284 aa
AA seq
DB search
MGNQMEKRTHLNYVGVPTSDPNGFEPDVEDGPRIGVSYIFSNDGDGDDDEEDDRSEPFPP
EEHLAKDQEKAFEPEDELECSLYFREECVFQRNTGTVTHSAESLLNKCSPGDVLEFVATG
QYPHWAVYVGDFQVVHLHRAEIKNGFLTDVSQGKRGRIVNGLYRYRALQPQVIVRNAVDH
VGSKDRELYWRNSECFAAWCRFGRREFKIGGEIRIGKQPYRFQMHFSDKKSHVLEFQCLE
DVIMERRRNEQIGKNAVMQELATHLNTAEAAEAAQDFEEEPLGH
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccagatggagaaacggacccatttaaattacgtcggggtgcccacatcggac
ccgaacgggtttgagccggacgtcgaagacgggccgcgcatcggcgtctcttacattttc
tccaacgacggcgacggggacgacgacgaggaagacgaccgttcggagccgttcccgccg
gaggagcacctcgccaaggaccaagagaaggctttcgaacccgaagacgagctggagtgt
tcgctttacttccgagaggagtgcgttttccagaggaacaccggaacggtgacccactcg
gcggagagtctactcaacaagtgcagccccggcgacgtgctggagttcgtggccacgggg
cagtacccgcactgggccgtctacgtgggcgacttccaggtggttcacctgcaccgagcc
gagatcaagaacggcttcctcaccgacgtgagtcagggcaagagaggccgcatcgtcaac
ggcctttaccgctaccgtgcgctccagccgcaggtgattgtgcgcaacgccgtggaccac
gtgggctccaaggaccgagaactctactggaggaactcggagtgctttgcggcctggtgt
cgcttcgggcggagagagttcaaaatcggaggggagatcaggatcggaaaacagccttat
cgcttccaaatgcacttttccgacaaaaagagccacgtcctggagttccagtgcctggag
gacgtgattatggagcgcaggaggaatgagcaaattggcaagaatgctgtgatgcaagaa
ctggccactcacctgaacacagcagaagcagcagaagcagcgcaggactttgaagaggag
cctttaggccactga
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