Syngnathus scovelli (Gulf pipefish): 125975257
Help
Entry
125975257 CDS
T08785
Symbol
myom3
Name
(RefSeq) myomesin-3 isoform X1
KO
K24495
myomesin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125975257 (myom3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125975257 (myom3)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125975257 (myom3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
V-set
Tissue_fac
C2-set_2
DUF4478
Motif
Other DBs
NCBI-GeneID:
125975257
NCBI-ProteinID:
XP_049586510
LinkDB
All DBs
Position
9:complement(10599226..10633135)
Genome browser
AA seq
1425 aa
AA seq
DB search
METRTVMHRELEEEKSRMSHSMKVSSRSNKKTFTSSEEEVVPYSNLVPIIPADVMSVKEI
LNVENVPRHRTWEILRETRVADKSYHRDEWTMFGNEYEKFDVRMMRNQRLLRTRVDKMAL
RNEAQRKADEYLEYLERLSQKVPDFGVPLRAHTVWEGMTVQFACVVQGCPAPQVTWYKDG
KVLKKPDMPWNYGLQQEFGLNYLEIRRCSPDDAGVYKVVAKSPLGEAMTFATLVVNSYKG
AIAGSDDSRTRASQQAGFATTFPPTWVKEGESLTLNCSFTSPLLPFQQEVTWLRDGTPLL
QSGAVDMKTTNNEASITINTVYKEHEGVYTVRLKTLDGILESSAYVYVEDALATVVGAPA
SPLLVQVSDINKDYVFLTWQPPSADGSSPIDGYYIERYDLSQGQWLRCNENPQKACHFPV
FGLKEGATYQFRVRAVNAAGVGRPSKATEPVVTEDPLRHARTMVVTVHGGTVVIVKDELE
GQVRTPLPPTDVHACELSDTYVVLSWSEPEPRGKEPLTFYVERSVEGKSSWEMVSLDAVV
NSPRFPVFDLVKGTRYHFRVRAVNKYGVSEPSEPSGPICLGKSQSVPAPPSSILVFPDTD
TSVSLQWQEPKDNKDVLGYYLYCSQNGQGDWKVINNKPVTEPRFTVHGLQNRKEYVFRIK
TVSRAGNSDYSEESPPILVKAAIHVPSAPSAIALLMCTGSEMVLGWRRPRRDGGDPVRGY
YLDMREAGTESWQEVNVKAVRERRATVSNLTSGLWYQFRVFAANMVGVGKPSDASEAFLC
EEWTMPEPGCPFDVEVREVSDHSLVLLWAAPLYEGRGPVTGYLLEISQGDDSDTWTAVND
KPVTDTFYKVPGLQAGQIYRLRVSAVNEAGVGAPSLPSESVTAQTSPDTKNIEVGVDDDG
FIYLAYECDHVCDGSVGLWNKNYTEPIDGARAQADNKDGRSVLTFNDPCEQDLALYTVEM
SDDPSLSSSYLLTAEDLERLKELSRQVQNPLIELKSGWHVEVSETGGVRLWLHTESLSDD
AELRLVFNDKEISSTPNRRIRFDKAAGLVEVLIDRMSHEDEGSYTAQLRDGRAKNQFTLV
LVDHKFREVMALANAKRRDHERKSGPYFEEFLSWNVNEECQVIIKCKVTNTSKDSTLKWF
KDGVAVAHTDYDPPSGVSALTIPQIDKKQAGSYKAVVSDARGEDVSTLALQGEEYDKLLQ
QLSKQCGLSAGPLRVQSTAEGFRLYCCLTYYISYLKTTWSFKGKQMEPQSRIRMGSNVHT
VWMDIFNPTENDKGKYSLDMFDGVETHQRHLDLSGQAFADALREHQRLKQEAVIEKNRAK
VTKGLPDVVAIMEGKSLCLTCFIEGDPTPDVFWLRNEREIAGDDQFFITREPGCSTITIN
NVHTDNSGKYSILVRNRCGSESVDVTVSVYKRGELPPSNAMEMGL
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaggacggtgatgcatcgagagctggaggaagagaaatccaggatgtctcac
agcatgaaggtgtcatcgcgcagtaacaagaagaccttcacctcgagcgaggaggaagtc
gtcccatactctaatcttgttcccatcatccccgctgacgtgatgtccgttaaggagatc
ctcaacgtggaaaacgtcccccgtcaccgaacatgggaaatcttaagggaaactcgagtg
gccgacaaaagctaccatcgagacgagtggacgatgtttggaaacgagtatgagaaattt
gatgtgaggatgatgcggaaccagcgtttgctacgcacacgtgtggacaagatggccctt
cgcaacgaggcacaaaggaaggcggacgagtatttggagtatctggagcgtctaagtcag
aaggtgccagacttcggtgtgccacttagggctcacacggtctgggaggggatgacggtg
cagtttgcctgcgtggtccaaggctgcccagctcctcaggtcacatggtacaaagacggt
aaggtgctgaaaaagcctgacatgccgtggaattacgggcttcagcaagaattcggtctt
aattacctggagatcagacgatgctctcctgatgacgccggcgtgtacaaagtggtggcc
aaaagtcctctgggtgaagctatgacctttgccacactggtggtgaactcgtataaagga
gccattgctggttcagatgattcccggactcgtgcttcgcagcaagccggctttgctacg
acctttccgccaacctgggtgaaagaaggcgagagtctcaccctgaactgttccttcacc
tcacctctgctgcccttccagcaggaagtcacctggttaagagatggtacgccactgctc
caatctggtgctgtggacatgaagaccacaaacaatgaagcttcaattacaataaacact
gtgtacaaggagcatgaaggagtttacacggtccgcctgaagaccttggatggaatcctg
gaatctagtgcctatgtctacgttgaagatgcgttggcgacagtggttggagcccctgcg
tctcctcttttggtccaggtgtccgacatcaacaaggactacgtcttcctcacttggcag
ccgcccagtgccgacggatcgtcgcccatagacggctactacatcgagaggtatgacctc
agtcagggccagtggctgcgctgcaatgagaatcctcagaaagcatgccacttcccggtg
ttcgggctgaaagaaggagccacataccagtttagagttcgggcggtcaatgcagccggc
gtggggcggccctccaaggcgactgagcctgttgtcactgaggacccactccgacatgcc
aggaccatggtggtcacggtgcacggagggaccgtcgtcatcgtaaaagatgaactggaa
ggccaggtccgaactcctctcccgcccactgacgttcacgcctgcgagctgagcgacaca
tatgtggtgctgagctggagcgagccagaaccccgagggaaggagccactcaccttctac
gtggagcggtcggtagaagggaagagcagctgggaaatggtcagtctggatgctgtggtc
aactctccgaggtttcccgtctttgacctggtcaagggaacgcgctaccacttcagagtg
cgtgcagtcaacaagtatggcgtcagtgagccgtcggagccgagtggtccaatctgctta
ggaaaatcacaaagtgtccccgccccaccttcctccatcctggtcttcccagacacagac
acctcggtgtctcttcagtggcaggaacccaaagacaacaaggacgtcctgggatattac
ctgtactgcagccaaaacggccaaggggactggaaggtcatcaacaacaaacccgttact
gagcccaggtttacagtccacggcctccagaaccgtaaggaatatgtgttcaggataaag
acagtgagtcgagcgggaaacagtgactactcggaggagtctccgcccatcctggtcaaa
gccgccattcacgtcccctcggctccttcggccatcgctttgctgatgtgcactggctct
gaaatggttttgggctggaggaggcctcggcgtgatggcggcgaccccgtgagggggtat
tacctggatatgagggaggcgggcaccgaatcgtggcaggaggtcaacgtgaaggcggtc
agagagcggcgggcaacggtttccaacctgaccagtgggctttggtaccagttccgtgtg
tttgctgccaacatggttggcgtggggaagccgtcggatgccagtgaggctttcctgtgt
gaggagtggaccatgccggagcctggttgtcctttcgacgtggaggtccgtgaggtgagc
gaccattcgctggtgctcctgtgggccgcgccactctacgaaggccggggtcctgtcacg
ggatacttactggaaatcagccagggcgatgattccgacacgtggactgctgtgaatgac
aagccggtcacggacacgttttataaggttccaggtcttcaggcgggtcaaatctaccgt
ctgcgtgtgtcggctgtcaatgaggcgggagtgggagccccctccctcccttcggagtca
gtcacagcgcagacctcgccagataccaaaaacattgaggtgggcgtggatgatgacggc
ttcatctacctggcatacgagtgcgatcacgtctgtgacggcagcgtgggtctctggaac
aaaaactacacggagcccatcgacggcgcgagagctcaggcggacaacaaggacggcagg
tctgtcctcaccttcaacgacccctgcgagcaagacctggctctctacaccgtggagatg
agcgacgatcccagcctgtcatccagctacctcctcaccgccgaagaccttgaacgcctc
aaagaactcagccggcaagtccaaaatccacttatcgaactgaagtcaggctggcatgtg
gaagtttcggagacgggcggcgtgcgtctgtggcttcacacggaaagtctgagcgacgat
gccgagctacgtctggttttcaacgacaaagaaatctccagcactcccaaccgcagaatc
cgctttgacaaggccgccggtctggtggaggtgctgatagatcggatgagccacgaggac
gaaggctcgtacacggcccagctgcgggatggacgggccaagaaccagttcacgttggtt
ttggtggatcacaaattccgtgaggtgatggccctggcaaacgccaagcgacgcgaccac
gagagaaaaagcggaccctacttcgaggagttcttgtcttggaacgttaacgaggaatgc
caagtgatcataaagtgcaaggtgacaaacacctctaaagactccaccctcaagtggttc
aaggacggagtggcggtggcacacaccgattatgatcccccgtctggagtcagcgcactc
accatcccacagattgacaaaaagcaggcgggctcttataaagcggtagtgtcagatgcc
agaggagaggacgtcagcactttggctttgcagggtgaagagtacgacaagcttctccag
cagctgagcaaacaatgcggattgtcggccggtccgctgcgggttcagagcaccgcagaa
ggtttcaggctctactgctgtctcacatactatatcagctacctgaagaccacctggagc
ttcaagggcaaacagatggaaccccagtccaggatcaggatgggcagcaacgtgcacact
gtttggatggacatcttcaaccccacagagaacgacaaaggcaaatactccctggacatg
tttgacggcgtcgagacacaccagcgccacctggacctgtcaggacaagcatttgcagac
gctttgcgggagcaccagaggcttaagcaagaggccgtcattgagaaaaaccgagccaag
gtgacaaaaggtctcccggatgtggtggccattatggagggcaagtctctgtgcctgacg
tgcttcatcgagggcgacccgaccccggacgtcttctggctgcgtaacgagcgggagatc
gccggcgacgaccaattcttcatcacccgcgagcccggctgcagtaccatcaccataaac
aacgtccacacggacaactcgggcaaatactccatactggtgcgcaaccgctgcggctcc
gagtcggtggacgtcaccgtaagtgtgtacaagcgaggcgagttgccacctagcaacgcc
atggagatgggcttgtga
DBGET
integrated database retrieval system