Syngnathus scovelli (Gulf pipefish): 125975268
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Entry
125975268 CDS
T08785
Symbol
preb
Name
(RefSeq) guanine nucleotide-exchange factor SEC12
KO
K14003
prolactin regulatory element-binding protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125975268 (preb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125975268 (preb)
Membrane trafficking [BR:
sscv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125975268 (preb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
PEP5_VPS11_N
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
VPS11_N
WD40_MABP1-WDR62_1st
DUF3551
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
125975268
NCBI-ProteinID:
XP_049586529
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Position
9:complement(7401543..7405879)
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AA seq
430 aa
AA seq
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MGKRKVPDLYRAPFPLYSIKIDPKAGLVVLAGGGGASKTGVKNGVHFLELQLVGENQYSA
SLLHSHDTVTRATMNLALGDGVIAAGQDGTCSLMTFADCTQKSGGTAADNDENNVQKGNA
RQRGGKRNKGGKDDAAAVTGSDMKDETAHINVTRLAELQSDLNPEDPLQKVVRFSHDLSL
LLTGGTDGHIRVWEFPSLKKKLDFKAHEGEIEDLDLSPGNKHLVTVGRDFACSVWRNNQQ
VMRLQWHKTMPQIAEKTYRYMACRFGKVEDQKDELRLYTVQIPHKRDRKPPPCYLTKWNG
KSFLPMLTAPCGAEVISSFAVSDSGTFLGLGTITGSVAIYIAFSLQRLYYVKESHAIVVT
DLAFLPDTFKGQNIKGNNETALFSVAVDSRCQLHAVHNRRSFPLWLVLFFCGLVVVGLVL
LLQYLFPGFF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacggaaggtgccagatctctacagagccccctttcccctgtactccataaaa
attgaccctaaagcaggactcgtggtcttagcaggaggaggaggagcttccaagactggc
gtcaagaatggtgtgcactttctggagctacagttggttggcgaaaaccagtacagtgcc
agcctgcttcattcacacgacactgtcacacgtgccaccatgaatttggcgttaggcgat
ggggtgattgctgcaggtcaagatggaacatgctctttgatgacatttgctgattgcaca
cagaaaagcggaggcacggctgctgataatgatgaaaacaatgtgcaaaaaggtaatgcc
aggcaacgaggtggtaaacgaaacaaaggtggaaaggatgatgctgctgctgtcactggg
tctgatatgaaggatgagacggcacacatcaatgtgacaagactggcagaactgcagtca
gatctgaaccctgaggacccactccaaaaggtggtcagatttagtcatgacctgagcctg
ctcctgacaggaggcacagacggacacatcagagtctgggagtttccatccctgaagaag
aaacttgactttaaagcacatgaaggagagatagaagacctggatctgagcccaggaaac
aagcacctggtaactgttggcagggactttgcttgcagtgtatggcgcaacaaccaacaa
gttatgcgtcttcaatggcataaaacgatgcctcagatagctgaaaagacatataggtat
atggcttgcagatttggaaaggtagaagaccaaaaagatgaacttaggctttacacagtt
cagatcccgcataaacgagaccgaaaacctccaccgtgttacctcaccaagtggaatggc
aagagcttcctgcctatgttgacagctccctgtggggcagaggtcatttcaagctttgct
gtcagtgactctggaacatttcttggactgggtactataacaggctcagtagctatctac
attgctttctcccttcagaggttgtattatgtgaaagagtcccacgccattgttgtgacg
gacctggctttcctccccgacacattcaaagggcaaaatatcaaaggaaacaatgaaacg
gctttgtttagtgtggctgtagacagccgctgtcagctccatgccgtccacaaccgaaga
tcatttcccctctggttggtgctgttcttctgtggcctcgtggtagttggacttgtactg
ctcctccagtatctcttcccaggctttttctga
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