Syngnathus scovelli (Gulf pipefish): 125975291 Help Entry 125975291         CDS       T08785                                  Symbol si:dkey-22o22.2 Name (RefSeq) neural-cadherin isoform X1   KO K27892   neural-cadherin Organism sscv  Syngnathus scovelli (Gulf pipefish) Brite KEGG Orthology (KO) [BR:sscv00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sscv04515]     125975291 (si:dkey-22o22.2) Cell adhesion molecules [BR:sscv04515]  Cadherins   Cadherin related    125975291 (si:dkey-22o22.2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Laminin_G_2 Laminin_G_1 Cadherin_CELSR2_9th Ig_Shg Cadherin_pro CADH_Y-type_LIR Fibulin_C EGF Cadherin_4 hEGF He_PIG Motif Other DBs NCBI-GeneID:  125975291 NCBI-ProteinID:  XP_049586593 LinkDB All DBs Position 9:1825390..1866106 Genome browser AA seq 2862 aa AA seqDB search MVQKEVSPRVLLLFLLVHLLPVSARRSHNSGRIAENSPAGTPVDGVAVPVLVGVCPGSGA TLKGSYASDFRLVHLHGHRRHMVLVSSKRLDREFIAMYELTVERCAWGPVLIQVEVTDVN DNAPHFTTGNRTLEVDEFTPIGTELIRLHAKDGDADVNGRVTFYAQPESNLLRVDPEIGQ VTLVGSLRGLSRVTTRFYVKDGGKQPLVAGPVVLEVLVRRSERTKPAKRRSRALAEEMTY AVTVPDQAGVGDVVFTVPDRRFEQRWFEVISDADSPVQIERDSGRVFLARSLREPAEVMV KIHKHRGDEWYLCRLTLSSLSQAHLQWTMFPVPYLAAVGPDSAPGSVVYRLSSRQRDDAL GQPQFLLLDGGMDCFEVDRRSGEVRTTGRPLAPSHEYHLQVQAVDAAGHKGPPATVSVLA GYRPPQFTNVTYQLNVAENMAVGQPVGAVQAVSFQKKPLAYVLQSNPGNLFSINQESGAL SLTRAVDYESGHNVHTLQVRASESDTGLSGVSEVVVHITDENDCTPEFLHSIYTRDNVPE NVAPGTSLLQILARDSDSGVNSELSYSVHGDDFDITSEGVVSAARRLDYERPNHIYEFLV VAVDAGTPPRTGTASIRIRVANTNDETPVFSQMVYKTFLSEDAGPDTLVAIVHANDPDGD GVSYAITGGNEDSNFQLDNQKGIIKLRRSPPPRLKGPQYVLTITATDDNASGGPYPLSSS AQVIVGINDINNNKPVFQECQNYSLKAAVLENQPPGTFVLRVQAQDADMGVNGEVKYGIM HRDGVSSGFDIHPDTGAITTAMSFDRERQREFTLSVTATDQAEEPLIGICQITVLVADQN DNDPKFENSRYQYFLREDTAVGTSFLRAAAHDDDQGSNAAIAYSLSPQKPAYLHINPSTG WIYVNQPISQTSKISQQIVASDGGNRSSSVELTVIITNVHNQPPHWEQPEYWVTVPENTV RDAKILTVKATSALGDPRVTYNLEEGQVPETNMPVRFYIKPNRAGGSASILVAENLDYET TRFFALRVRVQNVAAVPLASFATVYVNVTDVNDNVPFFLSSTYEATVPEGAEVGTSVAQV SAIDFDSGLHGMVHYTILKDESGDFALFSIDPMSGAIATRASFDREQKASYLIEVQSQDG SESARPGQQGHPNTDTAYVRIFVADVNDNAPTFPRSVYEVSVEEDKEVGFVIITVTANDH DEGANAKLRYQIAAGNTMGTFDVEPEVGTIFVAQPLDYEMEQRFELRLVASDGKWENETL VVVQVVNRNDEAPVFSMSEYHAVIQEELTELPVFIMEVSATDPDQDADQSAVRYSLHGQG AGGEFTINERTGRIYAQRRLDREERPAWRFLVLATDEGGSGLTGFADVLLEVRDINDNAP FFPCPALEADGCFVGQVAENSPADTSVMEMRAMDLDDANQGKNAALTYSIVKNVRNEINL NLFSINATTGTIYTVLRSLDRELEERYLVVVEARDGGGLAGTGTATILVSDVNDHPPIFS QRVYTAQVTEDLEVNSEVLVVSATDVDQGENAVVTFSIVGGDDDRKFLVETDKVNRRGVI KLKKKVDFEKPQERTFNLTLKAEDADFFSLAYCLVQVEDANDHAPVFLPQFYESPAMSED VAVGTIVAQVMATDLDSGQNGRFSYSIAKESDPYNQFLVDQSGWVVVAHSLDREKISQHR VMVLATDAGSPSLTGTAIVMVTVLDINDNGPEFEAPYRPVVWENTAAPQAVWMNASSPLL HATDRDLSSNGGPFSIRLLALTADAADFNLTDFRNGSAAVTALRTFDRERQKEYRLPILM IDSGSPAMSSTSTLTVVIGDRNDHPHSPGHANFIVYSYEGILPTTALGQIPSPDLDDWSE KTYRFEGKPSRLFSVNHSSGQLSIREGVPPGSYQLQVRVSDPAWPDVTSTAQVEVIELPR EALLNAASLRLRNMSVEELFSSRSGEESRFSRLGRTLADLLRTPPEKVHVFSLEDAGGEL SVWFAAHGSPYYKAEKLHGYVAANKAKLEAVLAASISQVGVDDCPHADCAHSGGCSTQVS FGQTPAALHSGNVSLVSLPAKTTARCGCRGREATHLPCSSYPSNPCLNGGACLDGPLGYR CKCPPMFDGPECQQTKHSFGGGGYAWFPPLAPCFQSHISLEFLTEAADGLLLYNGPLGPA AQPGELQDFISIELKHGVPVLKVNHGSGTLTLQLAAKSNVADRRWHRLDVISDGKAVQLV LDQCSGLQVSEPEGLVAGDPRETDESGCRAAGQTPGNERYLNVYQPLQLGGVKPTSPQPR YANFSGCIRNLLVDTQVYDLARPGESVDSSPGCRATDGVCLTAAGPSCGARASCLADWGS FSCECHPGHSGHKCDTVVPEFSLDSDSMLRFHLRGGGTTNRRTNIQMLLRTRANSGTLLS VTSRGADEYIVLEIAEGHLSVRANLGDGAHALRLPGQRVDVGQWVLVGLSRHDNLFVLRL EQGGGSREARARLGNRRELVVDPTSVTVGKGPHGGEDGDFQGCMRDVRFNGRALPLDGRS SSDLVSVLERRGVTLGCFSDACRAQPCPESLRCVDLWRKHQCRCPGGLVTLTDESGAERC VPSPCGPASCRNGGACQPLSADGFRCRCLEGFRGQRCELGQYRGHRLAALSPSSILAISM CLLVFFAVLVAVTVWNQKGSRNKFRKRGVYHIPAEHESWEDVRENILNYNEEGGGEQDQK GYDMTELKRPLRSSLSQSSSCTTAPLIKSSPGSQEEVHPACGPYLTIPQPHVHQHPPPPP SSSRSHVDFKNYVSRIVWEADHDEDALPEDVFHRWREEGSGTPAGSLSSLGYDDVEEEDN ARETTRERLSRWGPKFQTLSDLYDRPQVALSYGTVARRPPSH NT seq 8589 nt NT seq  +upstreamnt  +downstreamnt atggtccaaaaagaagtatccccgcgcgttctcctcctcttcctcttggtccacctgctt cccgtctccgctcgtcgctctcacaactcaggaagaatcgcggagaactccccggccggg acgcccgtggacggggtggctgtgccggtactagtcggtgtctgccccggtagtggggcc acgctgaaagggagctacgcgtccgacttccgtctcgttcacctccacggacaccggcga cacatggttttggtgtcatccaaacgcttggaccgagagttcatcgccatgtacgagctg actgtagagcggtgcgcttggggtccggtgctgatccaggtggaggtgacggacgtcaac gataacgcgccccacttcacgaccggtaatagaaccctggaggtggacgagttcaccccg atcggcaccgagttgatccggctccacgccaaagacggagacgcggatgtaaatgggcgc gtcactttttacgcacaacccgagtccaacttgctccgcgtggaccccgaaattggacag gtgacgctggtgggatccctccgcggactgagtcgagtcacaacccggttttacgtcaag gatggcggaaaacagccgctggtcgcagggccggtcgtcttggaggtcctggtgcgtcgt tcggagaggaccaaaccggccaagcggaggtcgcgcgccctggccgaggagatgacgtac gccgtgacggtcccggatcaagccggcgttggagacgtggtgttcacggtgcccgaccgg agattcgagcagcgatggttcgaggtgatctccgacgccgactccccggtgcagatcgag agggactccggaagagtgttcctggcgcgcagcctgcgggagcctgcggaggtgatggtc aagatccacaaacacagaggtgacgaatggtacctgtgccggttgactctgagctcgctc agtcaggcccacctgcagtggaccatgttcccggtcccctacctggcggccgtggggccc gactccgcccctgggtctgtggtctaccgcttgtcgtcacggcaacgtgacgacgccctc ggacagccgcagttcctcctattggacggcggcatggactgcttcgaggtggaccgccgc tcgggtgaagtcaggaccacggggcgccccctggcccccagccatgagtaccatctgcag gttcaggccgtggacgccgccggtcacaaaggtccgccggccaccgtgtcggtcctcgcc ggctaccgtccgccgcagttcaccaacgtcacctaccagctcaacgtggccgagaacatg gccgtcggacagcctgtgggggcggtccaggccgtgtccttccagaagaagccgctggcc tacgtgttgcaatccaatcccggcaatctgttcagcatcaaccaggagagcggcgccctc agcctcactcgcgccgtggactacgagagcgggcacaacgtgcacacgctgcaagtccga gcctccgagagcgacaccggcctcagcggcgtcagcgaggttgtggtgcacataacagac gagaacgactgcacccccgagttcctgcactccatctacacccgggacaacgttcctgag aacgtcgcacccggaacgtctctgctacaaattctggcccgggacagcgactcgggcgtg aactcggagctgtcttactcggtccacggcgacgactttgacatcacttcggagggcgtg gtcagcgccgcccgccggctggactacgagcggcccaatcacatctacgagttcctggtg gtcgccgtggacgcaggaacgccgcctcgcacgggaaccgcctccatacggatccgggtg gccaacactaacgacgagacgcccgtcttctcgcagatggtctacaagacattcttgagc gaggacgcaggccccgacaccctggtcgccatcgtccacgccaacgaccccgacggcgac ggcgtctcgtacgccatcacgggcggcaacgaggatagcaacttccagttggacaaccaa aaaggcatcattaagctacggcgcagccctccgcctcgactgaaaggccctcagtacgtc ctcaccatcaccgccaccgacgacaacgcgtccggcggtccgtacccgctcagcagctcg gctcaagtcatcgtcgggatcaacgacatcaacaacaacaagcccgtcttccaggagtgt cagaactacagtctgaaagccgccgttttggagaaccagccccccgggacttttgtgctg agggtccaggcccaggacgccgacatgggggtgaatggagaagtcaagtacggcatcatg cacagggacggggtgtcgtccggattcgacatccatccagacaccggcgccatcaccacg gcgatgagtttcgaccgggagcggcaacgcgagttcacgctgtcggtcacggccaccgac caggccgaggagccgctcatcggcatctgccagatcaccgtcctggtcgccgaccagaac gacaacgaccccaagttcgagaacagccgctaccagtatttcctccgagaggacacggcc gtagggaccagcttcctacgggcggcggcgcacgacgacgaccagggcagcaacgcggcc atcgcgtactcgctgtcgccgcagaagccggcctacctccacatcaaccccagcaccgga tggatttacgtcaatcaacccatctcgcagacgtccaagatcagccagcagatcgtggcg tcggacggcggcaaccgcagcagctcggtggagctcaccgtcatcatcaccaacgttcac aaccagccgccgcactgggagcagcccgagtactgggtcaccgtgcccgagaacaccgtc agggacgccaagatcctgacggtgaaggccacgtctgcgctgggtgacccgcgggtgacc tacaacttggaggagggtcaggtgcccgagaccaacatgcctgtacgcttctacatcaaa ccaaaccgggcgggcggctcggcttccatcctggtggccgagaacctggactacgagacc acccgcttcttcgctctcagggtccgagtccaaaacgtcgccgccgtgccactcgcctcc tttgcgaccgtttacgtcaacgtgacagatgtgaacgacaacgttccattcttcctgtcc tccacgtacgaggccacggttcccgagggggccgaggtgggcacgtcggtggcgcaggtg tcggccatcgactttgattcgggccttcacggcatggttcactacaccatcttgaaggat gagagcggagacttcgcgttgttcagcatcgacccgatgagcggcgccatcgccacgcgg gcttccttcgaccgagaacagaaagcttcctacctcatcgaggtccagtcgcaggacggc tcggagtcggcaagaccgggacagcagggacaccccaatacggacacagcctacgtccga atctttgtggccgacgtcaacgacaacgcgccgacgttcccgcgctcggtgtacgaggtg agcgtggaagaggacaaggaggtgggcttcgtcatcatcaccgtcacagccaacgaccac gacgaaggtgccaacgccaagctacgctatcaaatcgcggcgggcaacaccatgggcacg tttgacgtggagcccgaagtgggcaccatctttgtggcgcagccgctggactacgagatg gagcagcgcttcgagctgcgactggtggcctcggacggcaagtgggagaacgagacgctg gtggtggtgcaggtggtcaaccggaacgacgaggcgcccgttttcagcatgagcgagtac cacgccgtcattcaggaggagctcaccgagcttcctgtcttcatcatggaggtgtccgcc accgatcccgaccaggacgctgaccaaagcgccgtgagatactccctccacggacaaggc gccggcggcgaattcacgatcaacgagcgcaccgggaggatctacgcccaacgccgtctg gaccgggaggaacgtccagcctggaggtttctggtcctggccacggatgagggcgggtcg ggactcacgggattcgccgacgttctcttggaggtccgtgacatcaacgacaacgcgccg ttcttcccgtgcccggcgttggaagcggacggctgctttgtgggccaagtggccgagaac tcccccgccgacacctccgtcatggagatgagagcgatggatttggacgacgccaaccaa gggaagaacgcggcactgacttacagcatcgtcaagaacgtccgcaacgagatcaacctc aacttgttctccatcaacgccaccacggggaccatctacaccgtgttgcgctcgctcgac cgggaactggaggagcgttatctggtagtggtggaagcccgagatggtggcggattagcc gggacggggaccgccaccatcctggtttcggatgtcaacgaccacccgcccatcttctcc cagagagtctacactgctcaggtaaccgaagacctggaggtgaacagcgaggttctggtg gtgtccgccaccgacgtagaccagggcgagaacgccgtcgtgaccttcagcatcgtgggc ggcgacgacgacaggaagttcttggtggagaccgacaaggtgaaccgacgcggcgtgatc aagctcaagaagaaagtggactttgagaagcctcaggagagaactttcaacctcactctg aaggcggaggatgctgatttcttcagcctggcttactgtctagttcaggtggaggacgcc aatgaccacgcccccgtcttcttaccgcagttctacgagtcgccggccatgtccgaggac gtggccgtgggcaccatcgtcgctcaggtgatggcgaccgatctggattctggacaaaat ggccgcttttcttacagtattgccaaggagtcggacccctacaatcagttcctggtggac cagtccggttgggtggtggtggctcactctttggaccgggagaaaatctctcaacacagg gtgatggttctcgccactgacgccggcagcccgagcctgaccggcacggccatcgtcatg gtaaccgtgctggacatcaacgacaacgggccggaattcgaggccccctacaggccggtg gtgtgggagaacacggcggccccgcaggcggtgtggatgaacgccagctcgccgctgctg cacgccaccgaccgcgacctctcgtccaacggcggcccgttctccatacggctcctggcg ctcaccgccgacgccgccgacttcaacttgacggatttccgcaacggcagcgccgccgtc accgccctgcgcacgttcgaccgcgagcggcagaaagagtaccgactccccatcctcatg atcgacagcggctcgcccgccatgagctccaccagcacgctgacggtggtcatcggggac cgcaacgaccacccccactcgccgggacacgctaacttcattgtgtatagttatgaaggt attctgccaaccacagcgctgggccaaatcccgtccccagacctggacgactggagcgag aagacgtaccgatttgaaggcaaaccatccagacttttcagcgtgaaccatagttccggc cagctgagcatcagggaaggcgtcccccccggctcctaccagctgcaggtccgcgtgtcc gatcccgcctggccggacgtcacgtccaccgcgcaggtggaggtgatcgagctgccgcgg gaagcgctcctgaacgccgcttccctccgactacgcaacatgagtgtcgaagaactgttc tcgtccagaagcggcgaggagagccgcttctcccgtttgggtcgaacgctagccgatctc ctgcggacgccaccggagaaggttcacgtcttctccctggaagacgccggcggggagctg agcgtgtggttcgccgctcacggctcgccgtactacaaggccgagaagctgcacggctac gtggcggccaataaagcaaagctggaagccgtgctggccgcgtccatctcccaggtgggc gtggacgactgcccccacgcggactgcgctcactccggaggctgctccactcaggtgtcc ttcggtcagacgccggcggctctccactcgggcaacgtgtctttggtttccctgcccgcc aagaccacggcgcgctgcggttgccgcggtcgcgaggccacgcatctgccttgctcgtcc tacccgagcaacccctgcctcaacgggggcgcctgccttgacggtccgctcggatacagg tgcaagtgtccgcccatgttcgacggacccgagtgccagcagaccaagcacagctttggc ggcgggggctacgcgtggttcccaccgctggcgccgtgcttccagagccacatttctttg gagttcctgaccgaggcggccgacgggctgctgctctacaacgggcccctcggacccgcc gcccaacccggagagctccaagatttcatttccatcgagttgaagcacggcgttccggtc ttgaaggtcaaccacggctccgggaccctcaccctgcaactagcggccaaatctaacgtg gcagaccgccgctggcatcgactcgacgtcatcagcgatggcaaggccgtgcagctggtc ctggatcagtgctcggggctgcaggtgagcgagccggaggggcttgtcgccggagacccc cgcgagacggacgagtccggctgcagggcggccggccaaacgccaggaaacgagagatat ctgaacgtatatcagcctctccagctgggcggcgtgaagccgacgtctcctcagccgcgt tacgctaatttcagcggctgcatccgcaaccttctggtggacactcaggtgtacgacctg gcgcgacccggcgagagcgtggacagcagcccggggtgcagggcgacggacggcgtgtgt ttgacggcggccgggccctcctgcggggcccgcgcctcctgcttagccgattggggatcc ttcagctgcgagtgtcacccgggacacagcggacacaagtgcgacacagtggttccggag ttctcgttggattccgacagcatgctgaggttccatcttcgaggcgggggcaccaccaac cgccgcactaacattcaaatgctcctgcgcacccgcgccaactcgggcaccttgctctcc gtcacgtcccggggagccgacgagtacatcgtgttggagatcgcagagggccacctctcg gtccgagccaacctgggcgacggggcccacgctctgaggctcccgggccagcgggtggac gtgggccagtgggtgctggtgggcctcagtcgtcatgacaaccttttcgtcctgcggctg gagcagggaggcggctcgcgggaggcccgggcacggctggggaaccggcgggagctggtg gtggacccgacaagcgtcacggtggggaagggaccccatggcggagaagatggagacttt cagggttgcatgcgggacgttcgtttcaacggtcgagcgctccctctggacgggcggagt agcagtgatctggttagcgtactggagaggcgcggcgtcacgttgggatgcttcagcgac gcctgccgggcacagccatgccccgaatcgctgcgttgtgtcgacctgtggagaaaacat cagtgcaggtgccccggcggtctggtgacactgacggacgagtcgggagcggaacgctgc gtgccgtcgccgtgcggtcccgcctcgtgccgcaacggcggcgcgtgccagccgttgtcg gccgacggcttccggtgccgctgcctggagggtttccgcgggcaacgctgcgagctgggc cagtaccgaggccaccgattggccgctctcagtccaagttctattctggccatcagcatg tgtctgctcgtcttctttgccgtgctggtggcggtgacggtgtggaaccagaagggcagc cgcaacaagttccgcaagcgcggcgtctaccacatcccggccgagcacgagagctgggag gacgtccgcgaaaacatcctcaactacaacgaggaaggcggcggcgagcaggatcagaag ggctacgacatgacggagctgaagcgtcctctgcgttccagcttgtcccagtcgtcttca tgcaccacagccccgctcatcaaatcgtctccgggctcgcaggaggaggtacaccccgcc tgcggcccctacctcaccatcccgcagccgcacgtccaccaacaccccccgcccccgccc tcatcgtcacgttcccacgtggacttcaagaactatgtgtctcgcatcgtgtgggaggcc gaccacgacgaggacgcgctcccagaggacgtcttccacaggtggcgggaggaaggatcc ggaacgccggcgggaagcctcagctcactcgggtacgacgacgtagaagaggaggacaac gcaagggagacgacacgcgagcggctgtcgcgctggggacccaaattccagacgctgagc gacttgtatgaccgcccccaagtggcgctctcgtacgggaccgtcgcacgacggcctccc agccactag

DBGET integrated database retrieval system