Syngnathus scovelli (Gulf pipefish): 125975319
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Entry
125975319 CDS
T08785
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125975319 (rnf115a)
04121 Ubiquitin system [BR:
sscv04121
]
125975319 (rnf115a)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125975319 (rnf115a)
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125975319 (rnf115a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125975319 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
C1_2
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
125975319
NCBI-ProteinID:
XP_049586642
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All DBs
Position
9:2623471..2627729
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AA seq
315 aa
AA seq
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MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCESGFIEEVTEDSSSLLEGGANGLDDAT
NQFAELWHLLLMERPFSIDGDNPDSEPRLPGGRLAGLGDFGGFASGPIGGSVPAGLGGPM
GSLGAGDHWGPARPPRLHTQRRHRSRVSSRPDRSPAVEGIVQQFLAGLFANSGVSGTPPL
SWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKERISSLPFVNISQEQADCC
MECPVCKEDFEVGEPVRQLPCNHFFHSACIVPWLEMHDTCPVCRKSLNGEDSSSQPPSEP
PSLSMDPRTQERWSF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttcccccgcatcggtttttttgtcactgttgtaagggagaa
gtaaaccccaaactaccggagtatatctgtcctcgctgcgagtcgggcttcatcgaggaa
gtgacggaagattccagcagcctcttagagggaggcgccaacggactagatgacgcaacc
aatcagtttgcagagttatggcacctgctgttaatggagcggcccttttccatcgacggc
gacaaccccgactcggaaccacggctccccggcgggcgcctggctgggctcggcgacttc
gggggattcgcaagcggacccatcgggggttcggtccccgctggcctcggggggcccatg
ggttcgctaggcgccggcgaccactggggcccggcacgacccccgcgcctacacacccag
aggaggcatcggtccagagtcagcagcaggcctgaccgctcgcccgctgtcgaagggatt
gtacaacagttcctcgccggtcttttcgccaactcgggagtctcgggcacgccgccgttg
tcatggacaggcatgctgcattccaatccgggagactacgcctggggacagggaggcctg
gatgctgtaataacacaattactcggtcagctggagaacacagggcctcctccagccgag
aaagagaggatctcttctctaccctttgtgaatatttctcaggaacaagcagactgttgt
atggaatgtccagtgtgcaaagaagactttgaggtgggcgagcccgtcagacagctcccc
tgcaaccacttcttccattcagcctgtatcgtaccctggctggagatgcacgacacgtgt
ccggtttgtcggaagagtttgaacggcgaagacagcagcagtcagcccccgtcagagccc
ccctcgctctccatggacccccgcacacaggagagatggtccttctga
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