Syngnathus scovelli (Gulf pipefish): 125975324
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Entry
125975324 CDS
T08785
Symbol
tshz1
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125975324 (tshz1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125975324 (tshz1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
zf-C2H2_6
Zap1_zf1
zf-met
Zf-C2H2_ZNF451
Homeobox_KN
DUF760
DUF7410
DUF629
Motif
Other DBs
NCBI-GeneID:
125975324
NCBI-ProteinID:
XP_049586649
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All DBs
Position
9:complement(10222472..10256613)
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AA seq
1194 aa
AA seq
DB search
MPRRKQQEPRRSAAYMPEDELKAPTQEEEEHLQDDGLSLDGQDTEFLCNEEEEDVEGGQP
PSYRDSPLSNGTNPDAGYGSPLSDASDRLTDFKSTSSRDGHEKEGTTLPFSPSNGLSFQD
SLAQMKAVYANLISDASWSSITMDLMKSKSAAASSINSTLNNSEAASSAPVSTATTTTTT
NKSNGVNIVTSPHNGRGSSTTVTHTSTTTVNTNGTAASSVSIHNATSSSGSSSGGTNNGS
GVAYDWHQAALAKTLQQTPYHLLPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSAA
YDTLVGLTVHMNETGHYRDDNKDKEEDQGKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGH
SFESLQDLSVHMIKTKHYQKVPLKEPVPALATKLVPSSTKKRAMQDTIISPCSPESVHAG
SGGGGLSLGDISKDAKSVANPYVTANNRYGYQNGASYTWQFEARKAQILKCMECGSSHDT
LQQLTAHMMVTGHFLKVTNSASKKGKQLVFDPVVEEKIQSIPLPPTTTRLPVPGSIKSQP
VSPALSSGSEEKKEVSEDEKFESGEPVEKKIKEERDDSGEKVETDTTSYKYLREEDLEET
PKEGLDILKSLENTVSSAISKAQTGTPTWGGYPSIHAAYQLQGAMKSSTTVLPPTIQSVQ
MQPMFNSGLRGLASDPNSVIHSPRSPTSPTLLRSNVTAMEELVEKVTGKAAAVKKEKEEK
MVSAERARPPSLVKSPSPVLREQREQLASPNDLVAGKASGVRSTSPGSVESELICKKEPK
ESLVDVYNNSKNGLEACQSPVTNGNSLGIITDHSPESPFVNPLSALQSIMNTHLGKASKA
VSPAADPLSMLYKISNSMMDKKPAFNPTPQGKTAEPINHFALYENNDQPIDLSRSKSSAN
SNSNTNNNNSSSTVNNVLNGNKPIISMPETVSSPLRENALMDISDMVKNLTGRLTPKSST
PSSISEKSDADGSAFEDALEDLSPVQKRKGRQSNWNPQHLLILQAQFASSLRETPEGRYA
MTDLGPQERVHICKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNMDSCQPVFLCGDCAS
QFRTPSSYISHLESHLGFSLKDLSKLSTEHLREQQAASKVITDKMTFGSSLSALTTPEDD
TGSVYQCRLCNRTFVSKHAVKLHLSKTHGKSPEDHLVFVTALDKLEKLDKMESV
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagaaagcagcaagagccgcgccgatcagcagcgtacatgcccgaagatgaa
cttaaggcgcccactcaagaggaggaagagcacctccaagatgacggcctctcattagac
ggccaggacactgaatttttgtgcaacgaggaagaggaagatgtggaaggaggccaacca
cctagttatagagactctcccctcagcaatggcaccaaccctgatgctggctatgggtcc
ccgctgagtgacgccagtgacagactaacagatttcaaaagtacctcctctcgggatggt
cacgagaaagaaggtacaaccttgcccttctcgcccagcaatggcctatctttccaagat
agtttggctcagatgaaagccgtctatgcaaacctcatttcagatgcctcttggtccagc
attacaatggatttaatgaaatccaagtctgctgcagctagcagtataaacagcaccctc
aacaattcagaagctgcctcttctgccccggtttctacagcaacaacaacaacgaccaca
aacaagagcaatggggtcaacatagtcaccagtcctcacaacggcagggggtccagcacc
actgttacccacacaagcaccacaaccgttaacacgaatggcacagcagctagctcggtt
agcatccacaatgcaaccagcagtagcgggagcagtagtggcgggactaataatggcagt
ggtgtggcctatgactggcaccaagcagcacttgccaagactcttcagcagaccccctac
catcttttacccgaacctagccttttcagcacagtgcagctatatcgtcaaaacaataag
ctgtacggctctgtcttcactggtgcaagcaaattccgctgtaaagattgcagcgcggcc
tatgacaccctggttggtttgacagtccacatgaatgagactggccactatcgagatgac
aacaaggacaaagaggaggatcagggaaagcgctggtccaaaccccgcaaacgctccctg
atggaaatggaaggcaaagaggacgctcaaaaggtactcaaatgcatgtactgtggccac
tcctttgaatctctgcaggacctcagcgttcatatgatcaagaccaagcattaccaaaaa
gtgcctctcaaagaaccagtgccagccttggccactaaactggttccctcctccactaaa
aaacgagcaatgcaagatacgataatttccccttgctctccagagtctgtccatgccggt
agtgggggaggaggtttatcacttggtgacattagcaaagatgcaaaatcagtagccaat
ccttatgtaacagcaaacaaccgatatggctaccagaatggggccagctatacgtggcag
tttgaagcacgaaaagctcagatcctgaaatgcatggagtgtggtagctcgcatgataca
ctgcaacagcttactgctcacatgatggtcacaggtcactttttgaaggtcacaaattct
gcatccaagaaaggcaaacagctggtgtttgatcctgtggttgaagaaaagattcagtcc
atcccactgccgcctactaccaccagactccctgtacctggtagtattaagtctcagccg
gtttcccctgccctctcctcgggctcagaggaaaagaaggaagtgagtgaggatgagaaa
tttgaaagtggggagccagttgagaaaaaaatcaaggaggagagagatgactcgggtgag
aaagttgagactgacaccacatcatataaatatcttagagaagaagatctagaggaaact
ccgaaagaaggtctagatattcttaaatcccttgaaaacacggtgtcaagcgctattagc
aaggctcagacaggcactcccacttggggtggatatccgagcattcatgcagcttatcag
ttgcaaggtgccatgaagagctcgacgactgttctgccccccactatccagagtgtccag
atgcagccaatgtttaacagtgggcttcgagggctcgccagtgatcccaattcagtcatc
cactcgccgcggagccctacgtctcctactctactcaggagcaacgtcactgccatggag
gagctggtggagaaagtgacagggaaagctgctgctgtaaagaaagaaaaggaggagaag
atggtcagcgcggagcgagcccgacctccttcgttggttaagtccccctctcccgtactg
agggagcagagagagcaactggcctctccaaatgacctagttgcaggtaaagcatctggt
gtgagaagtaccagcccaggcagtgtcgaatccgagctgatctgcaagaaggagcctaaa
gaaagccttgtggatgtctacaacaactcaaagaacggcctcgaggcatgccagtcgccg
gtcactaacggcaacagtctcggcatcattaccgatcactcaccagaaagtccttttgtc
aatcctctcagtgcactccagtcaatcatgaacacacacctgggtaaggcctccaaagca
gtaagcccagcagcagacccactgtccatgctttacaaaatcagtaacagcatgatggat
aaaaagccagccttcaacccaacacctcagggcaaaaccgctgagcccatcaaccacttt
gctttgtatgaaaacaacgaccaacccatagacctgagtagaagcaagtcaagcgctaac
agtaacagtaatactaacaataacaacagcagtagtacggtcaacaatgttttaaatggt
aacaaacctattattagcatgccggaaacagtttcctctcctttgagagagaacgctctc
atggacatctctgatatggtaaagaacctcaccggaagattgactcccaaatcgtcaaca
ccgtcctccatctcagagaaatcagatgccgacggcagtgcatttgaggatgctctggag
gatctctccccagtgcagaagagaaaagggaggcagtccaactggaatccccagcacctc
cttatcctgcaggcacagtttgcctccagcttgcgggagaccccagaaggccgctacgct
atgactgacttgggccctcaggaaagggtccacatctgtaagttcacaggcctctcgatg
acgaccatatcccactggctagccaatgtcaagtaccagctgagacggaccggtggcacc
aagtttctcaaaaacatggactcttgccagccggtgttcctctgtggtgactgcgcttcc
cagttcagaactccctcctcctatatcagccacctggagtctcacttgggattcagcttg
aaggacctgtccaaactgtcaactgaacacctacgggagcagcaggctgcctcgaaggtg
atcacggacaaaatgacattcggcagttccctgtcagccttgactacgccagaggacgac
actggctccgtgtaccagtgcagactttgtaatcggacattcgtcagcaaacacgcagtc
aagttgcacctcagtaaaacccatggcaagtctcccgaggaccacctggtgtttgttaca
gctttggataaactagagaaactagacaaaatggagtcagtttaa
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integrated database retrieval system
