Syngnathus scovelli (Gulf pipefish): 125975352
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Entry
125975352 CDS
T08785
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125975352 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125975352 (tex10)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
125975352 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
HEAT_EF3_N
Vac14_Fab1_bd
MMS19_C
TOR1L1_N
HEAT_EZ
HEAT_DAAF5
HEAT
HEAT_2
PSME4_C
COG6_N
Motif
Other DBs
NCBI-GeneID:
125975352
NCBI-ProteinID:
XP_049586765
LinkDB
All DBs
Position
9:3303336..3309574
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AA seq
943 aa
AA seq
DB search
MAKIKSKTKKRQDDFHKVKLKVGKKKPRADNATNTNFRTKGIYLPEQLKTDTSGPTTNRQ
LGINDLLSQLHHYNANMKHSALLGLRELLSTNPSLLEQHMSRLLSEVAAVFTDKDANVRM
AATRVLRYIAQSVPAERVAPFFPLLSAHLCCAMTHIELSIQEDAMKVLDVLLEHYPALLA
ERPAVLITNFLELISHRQSHGGAKKDKEAKGCTWALSVNPNRTITSQQWRLSVLLRLGRF
LQAVVEERPVEEGDMSAPSVGAFSSCSGSRITPLNVTWEELINSKIGVKVYEHSGSQPSP
HSTFKLGPDSAHPGEAREGLDSVEAVQIFAATLVPLLLEVWVEANTGDSPWNHSDGNHLL
SPDAMSTMFQVLFILQLLRKLAPRQEHQDTLDSWFRKEYLGEFKQHFMKNFPYGLHDTPK
QRKKVNNKRVKLTPSTPDVSVDPLALNITLCQVMVSLSQRQEVGREADGDWLTPLRTFVR
DTLGGEVKLSYRQLHMLLGTVWKMVLTQKNKTVTEDLLAAVYSYYQQRHLTLQTRSLLLS
FYSKIYLQEQEQSHLTRSKVLSRWLAYLPVQLSQLGYRNPALSALLIQSIQAAASRGNKD
LLSSLQTHACKLYDPQEGAVVLLPSECQQQMVQLLYFLPNMSRALLANLSFCCSTGRISA
SLAASLIRIIHMRSSLSGWSVGSQDAAVQDVDYISFLFSTLTGFSCEQLASLQEAGDTRA
PPPSPLSPLKLHRTPLDHFTHRWDVAEEVCQRLETLGSNAQCFEILQNGIFEYMTKLRVV
PDSMAAGLLQAVSRLMDLSLLPIEPVLRLLSRCCLSLLTLLVTQPQQEAERDQHKREAIW
GVCVASLSTVPRLLRMVLQLRVADLSQEELPQLGQILSMLMQHTPLQNQLMANTSLLQEI
IQQLTRYSRGATREQWLSDLLYCYSVTVAHGSSAQRGNLRNIY
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaataaaatccaagacgaagaagcgacaagatgactttcacaaagtgaaatta
aaagtggggaagaagaagccgagagcagacaatgctaccaacacaaactttcgcacaaag
ggaatatatctgcctgaacagctgaagaccgacacaagtggtcctaccacaaacaggcaa
cttggcatcaatgacttgttgtctcagctccaccattacaatgccaacatgaaacacagt
gccttgctgggcttgagggagcttctgtcaacgaatccatctctgttggagcaacatatg
tcacgtttgctatctgaggtagctgctgtgttcacagacaaagatgccaatgttcgaatg
gcagccacacgtgtgctcaggtatattgcgcaatctgtaccggcggaacgagtggctcca
tttttccccctcctcagtgcccacctgtgttgcgccatgactcacattgagttgagcatc
caagaagacgctatgaaggtcctggatgtgctgttggaacactacccggccctgctcgct
gaacggcctgcagtgctcatcaccaacttcttggagttgatatctcacagacagagtcat
ggaggagctaaaaaagacaaggaggccaagggatgcacttgggcgctttccgtcaacccc
aacaggaccattaccagtcagcagtggcgtctctctgtgcttctcagactcgggcgcttc
cttcaagcagtagttgaggaaagaccagtggaggaaggtgacatgtcggctccatctgtg
ggagcgtttagttcttgcagcgggagcaggatcacgcccctgaacgtcacctgggaagag
ctcatcaacagcaaaatcggtgtgaaggtgtatgaacactctggaagccaaccgagtccg
cactcaacatttaaactcggaccagattcggctcatccaggcgaagcacgtgaaggtttg
gactcggtggaggccgtgcagatctttgcagcgaccctggtcccacttttgctggaagtg
tgggtggaagccaacactggagattctccctggaaccactcagacggcaatcacctgttg
agcccggacgccatgtccacaatgttccaggtcttgtttattcttcaactgcttcgaaaa
ctggcgccacggcaagagcatcaagatacgctggattcatggttccgcaaagaatactta
ggagagtttaagcagcactttatgaaaaactttccatacggtcttcacgacacacccaaa
caaagaaagaaagttaataataagagggtgaagctgactccatctacccccgacgtgagc
gtggatcctctggcgcttaacatcacactttgccaggtgatggtgtcactgagccagagg
caggaagtcggccgagaggccgacggagactggctgactcccttgaggacttttgtgcga
gacacgctcggcggcgaagtgaagctaagctatcggcaactgcacatgctgctcgggact
gtctggaagatggtgctcacccaaaaaaacaaaacagtgacagaagacctgttggccgca
gtgtactcgtactaccagcagaggcacctgacgctacagaccagatctcttctgctgtct
ttctacagcaagatctacctgcaggaacaggaacagtcacatttaacaaggagtaaagtg
ctcagtcggtggctggcgtaccttcctgtgcagttgtcccagctggggtatcgtaacccc
gctctgtcggcgttgctcatccagtccatccaggctgccgcttcccgaggcaacaaagac
ctgctcagcagtctacagacgcacgcctgcaagctttacgatccgcaggaaggtgctgtg
gttcttctaccgtcagagtgccagcaacaaatggtgcagctgctctacttccttcccaac
atgtcccgagctctcctggccaatctaagcttctgctgtagcaccggacgaatctccgct
agcctcgccgcttctctcattcgtatcatacacatgaggtcatctttgagtggatggtca
gtcgggagccaggatgccgccgtacaggacgtggactacatcagcttcctgttctccacc
ctgaccggcttctcatgcgagcagctcgcctccctgcaggaggccggcgacaccagagca
ccgcccccctcgcctctgtcgcccctaaagcttcaccgcaccccgctggaccacttcaca
caccgctgggatgtcgcggaggaagtgtgccaacgtctggaaactctaggttcaaacgct
cagtgctttgagatcttacaaaatggaatctttgaatacatgaccaagctgagagtcgtg
cctgacagcatggcggcaggccttctccaagcagtttccaggctaatggacctgtccctc
ctgcccattgaacccgtgctacgcttgttgtcccgctgctgcctcagccttctgaccctg
ctcgtcactcagccgcagcaggaggcggaacgcgaccagcataaaagggaggccatttgg
ggtgtgtgcgtggcgtcgttgagcaccgtgcctcgcttgctgaggatggttttgcagcta
cgcgtggcggatctgagccaggaggagttgccccagctgggacagattttgtccatgctg
atgcagcacactccgctgcaaaaccagctcatggccaataccagtctgctgcaagagatc
atccaacaactcactaggtattcccgcggtgccacaagggaacagtggctgagcgacctg
ctctactgttacagcgtcaccgtggcccacggctcgtctgctcaacgtggaaaccttcgg
aacatctactga
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