Syngnathus scovelli (Gulf pipefish): 125975363
Help
Entry
125975363 CDS
T08785
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125975363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
125975363
NCBI-ProteinID:
XP_049586794
LinkDB
All DBs
Position
9:complement(3710659..3717547)
Genome browser
AA seq
817 aa
AA seq
DB search
MKSNQERSNGCLPPKKREILALEQRPVAVATPTPPVVHQNPAPHTENLAWLASVASERCR
SRDSESPRCPVPSTSSSSSPMIPTSATTLSAVPLASLPAVYSTAIPQPTGTIQFAQLGPN
VQFISSGPYAGYISSHVVPANTSPMGQRPHLDGYTTALISPGTKGEQQFQIGLSPTELAP
VSLPSSPQVTSQYIHLDSRTPLTVSGAAVSTPGAHLQLQPHHAVLPQTLTLAPSQLVVQY
ADGCGGKKPEVHAKGVLNGELEVVKQMKAPTQPANHQQVQSYEARHILVPADYGQNQTGL
QTSLVLVAQPNHSNDQEHGSNKISLVQTEKGGICLGKPISRSSSYSSLSSSEVMRSVTPH
TVIQTTLAPEELPASLYSSTQAPIIGYITSGNQHAVSYHAALPQHLVIPSGQSLLIPVSS
ANNGTEMETSRAVSSLTATTTPQISTAMPHAYLATALSKCESLGNDGNQVPSSIGPAPAL
PAPVPAVVAAPSPVPPPISHPVNAPVPASIQASPTMSSPSSPVALPPFFMRGSIIQLADG
ELKRVEDLKTEDFIQSAEISNELKIDSSTVERIDSGQSPNAVVIQFSVGELKAQVCVEVL
VEYPFFVFGQGWSSCCPDRTTQLFELSCAKLCVGDVCVSLTLRGLRNGSLTDSQSLGARL
KTTRLSDPSNNSDAAVSNSPRPTITGINSGIVMKASGAERIAGSMSGRQLPTEMQLNPGS
AEGICGGESVLAISASAGKRQGSDKIDMPTLCKIQSRDPDRTTVRKRRWSAPEREQTERV
DEEPPLTLLKPSIISQEVKISIEGHSSSGREKCLIKL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaatcaggagcgaagtaatggatgcctgccgcctaaaaagcgagaaatcctg
gcgctggagcaaaggccggtggcagtggcgacaccaactcctccagtggtccatcaaaat
cctgctccacacactgagaacctagcatggctggcgagtgttgccagtgaacgatgcagg
tccagagactcggagagcccgagatgtcccgtcccgtctacttcgtcctcatcctctccc
atgattccaacttcagcgacgactctttcagcggtgccgctggcctcgctacctgcagtt
tattccacagccattcctcagcccacaggaaccatccagtttgctcagctcggaccgaac
gttcagttcataagttccgggccctatgccggttacatctcttctcatgtcgttccggcc
aacaccagcccgatgggacagcgccctcacctggatggttacactactgccctgatctcg
cctggcaccaaaggggaacagcagttccaaattggcctctctcccacagagcttgctccc
gtctcccttccgagttctccacaagtcaccagccagtacatccatcttgatagcagaaca
ccattgaccgtcagtggcgccgccgtctcgacacctggagctcacctccagctccagcct
catcacgctgtcctccctcaaacgctcactctcgcaccctcccagctggttgttcagtat
gcagacggttgtggtggaaagaaaccagaggtgcacgctaagggtgtgctgaacggtgaa
ttagaagttgtcaaacagatgaaagctcccacccaaccagcaaatcatcagcaggttcag
agctatgaggcaagacacatccttgtgcccgcagactatggccagaaccaaacaggcctt
cagacctccttagtacttgtggcccagcctaaccatagcaatgatcaagagcatggctcg
aataagatttccttagttcagactgaaaagggaggcatctgtttagggaaacctatatcg
agatcttcctcctactcctccctctcgtcatcagaggtgatgaggtctgtcacaccccat
acagtcattcagacaactctagcccccgaggagctgccagccagtctttattcttccaca
caagcccccatcattggctatatcaccagcggcaaccagcatgcggtcagctaccatgcg
gcactgccgcagcacctggtcattccaagtggtcagtccttgcttattccagtcagcagt
gcaaacaacggcacagaaatggagaccagccgggctgtcagttcgctgaccgcgaccaca
acgcctcaaatatccaccgccatgcctcatgcctatcttgccaccgccctgtccaaatgt
gagtctttaggcaacgacggaaatcaagttccttcctcgatcggcccggctcctgctctc
ccagccccagtccctgcagtagtagcagcaccctccccagtcccacctccaatttctcat
ccagtcaatgctccagtccccgcttccatccaagcttcacccaccatgtcctcaccttcc
tcccctgtggctctcccgcctttctttatgcgaggctcaatcatccaacttgctgatggg
gagctgaagcgtgtggaggacctcaaaacagaggacttcatccagagtgccgagatcagc
aacgagctgaagattgactccagcaccgttgagcgaatcgatagtggtcagagtcctaat
gctgtggtcatacagttttccgtgggggagctgaaggcccaggtgtgtgtggaggtgctg
gtggaataccctttttttgtattcggacaagggtggtcctcatgctgtccagaccggacc
acgcagctctttgagctgtcctgcgctaagctgtgcgtaggtgatgtttgcgtgtcattg
actcttcggggtctaaggaatggttcgctaacagacagccagtctttgggggctaggctg
aaaaccacaagactgtctgaccctagcaacaactcagacgcagctgtcagcaacagtccc
aggccaaccattacaggaattaacagcggtatcgttatgaaggcttctggtgccgagagg
atagctggatctatgtcagggcggcagttaccaaccgaaatgcaactaaatccaggatca
gcggaggggatctgcggaggagaatctgtgttggcaatctccgcaagtgctggtaaaaga
cagggatcagacaaaatagatatgcccacgctctgcaaaatacagtccagagatccagac
agaaccaccgttcgcaagagacgatggtcggctccggagagggaacagactgaaagggta
gacgaggagcctccgttgactctactcaaaccctccatcatctcgcaggaggtgaaaatc
agcatagagggccactcgagcagtggcagagaaaaatgcttgatcaaactatag
DBGET
integrated database retrieval system
