Syngnathus scovelli (Gulf pipefish): 125975377
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Entry
125975377 CDS
T08785
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125975377 (rbm12bb)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125975377 (rbm12bb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
125975377
NCBI-ProteinID:
XP_049586877
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All DBs
Position
9:complement(3777393..3781177)
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AA seq
665 aa
AA seq
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MYSYESLLTFCLSEEDRQRRLRSNDRIEAVLNIVSIFPNTCTRVTLSLVCLSMAVVIRLQ
GLRITAGSQDIRKFFTGLKIPDGGVHIIGGEKEEAFIIFASDEDARRAMTRSGGQIRGGS
VTLLLSSKAEMQTVFEKSAINAELEKKRNLEDNARHARRSTESDSNKRPASKVDMSPPLR
QKRPNSNEDAPNVVSPCVFLKGLPFNVSQREIVDFFKGLHIVDVVLLKNATGRNNGMGLV
KFSCTAEVSEALKRDRDYIGSRYVEICPTTEEDWRRSTGRTPVWGNPGGDRFERRRSPLR
GPMRSQSPIGQRGSSPNDEFCIMVENLSFAVETEDIKRLFHHARLDDDQILFMNFDDRKS
RSAFVLFKTMREFREATEEETKPFFNRLIHIRPISREKMVAIMESQKMDISPCGNSRRSR
SNERTSSNPRDHSDTEKCLLVQNLPFDVRKMEVMDLFVGMNLSDDDVHLLRDDTGSGTGK
ALVLFHSDSAAMKALSLDGQRFLGAKLALKYVSRAHMRELIAGPQQRFNEFQGADEECSD
FRGSRGANMPMNAGPQNYGGYNSAGHPFDRGNGARSSGGPPRHNFSEPTCVKLVNLPFQI
KIEEIYDFCHGYRILPGSISLQYDRGGAFKGSATVVFETREEAAIAVEELNGRPIGSRKI
QLLFV
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtacagttatgagtcgttgctcactttttgtctgagcgaagaagacaggcaaaggcgg
ctgcgaagcaacgatcgaatcgaggctgtgctaaatattgttagcatttttccaaatact
tgcacaagagtcaccttgtcgcttgtgtgcctcagcatggcagtcgtcatccgtttacag
ggattgaggatcactgccggttcgcaggatattcgcaaattcttcactggactcaaaatt
ccagatggtggtgtacacataatcggaggcgagaaggaggaagctttcattatttttgct
tccgacgaagacgcgagaagagccatgacgcgctcaggggggcaaatccgcggggggtct
gtgactttgctgctcagtagcaaagcagagatgcagactgtatttgagaaaagtgccatc
aatgcggagctggagaaaaagagaaatcttgaagataacgcaaggcatgcccgaagatcc
acggagtccgattctaacaagaggccggcgagtaaagtggacatgagtcctccactgcgc
caaaagagaccaaactcaaatgaagacgccccgaacgtcgtctccccgtgtgttttcctc
aaagggctgcctttcaatgtgtcccaaagagaaattgtggattttttcaagggtttacac
atcgttgatgtcgtcctgttgaaaaacgcaaccggacgaaacaacggaatgggtctcgtg
aaattttcatgcacggcggaagtctcggaagccttgaagagggacagggactacatcggt
tctcgctatgtggagatttgtcccacgacggaggaggactggcgacggtcaaccggaagg
acacccgtgtggggcaacccgggaggcgacaggtttgaaagacgtagatcgcctttgcgt
ggtccaatgaggtcacagtcaccaataggccagagggggtcatcgcccaatgatgagttc
tgcattatggtggagaatctctcctttgcagtggaaacggaggacatcaaaaggcttttt
caccacgcaaggctcgatgatgaccagatcttgttcatgaattttgacgatcgcaaaagt
aggtccgcctttgtgctcttcaagaccatgcgcgagtttcgcgaagcaacagaagaggag
acgaagccctttttcaatcgattgattcatatccggccgatctccagagaaaaaatggtg
gccatcatggagtctcagaaaatggatatcagcccttgtgggaactctagaagaagtaga
agtaatgagaggacttcatccaaccccagggatcattctgacacagagaagtgcttgctg
gtgcaaaatctacccttcgacgtacgcaaaatggaggtcatggacttgttcgttgggatg
aatctctcggacgatgacgtgcacttgctgcgtgacgacacaggttcggggaccggcaag
gctttggttctcttccactccgactcagcggccatgaaggccctctctctcgacgggcag
aggtttctcggtgcaaagcttgctctcaaatacgtcagtcgtgctcacatgcgggagttg
atcgccgggccacagcaaagattcaatgagttccaaggcgccgatgaggagtgctccgac
ttcaggggttctcgtggcgctaacatgccaatgaatgcggggcctcaaaactacggcggc
tataattctgccggccacccgttcgacagaggcaacggtgctcgtagcagcggaggtcca
ccgaggcacaattttagcgagcccacatgtgtgaagctagttaatttaccattccaaatc
aaaatagaagaaatctacgatttttgccacggatatcgtattcttccgggatccatctca
ttgcagtacgataggggcggagctttcaaagggagcgcaactgtagtatttgagactcgg
gaggaggccgctatagcagtggaggaactcaatggaaggccaattggttcgagaaagatt
caactactctttgtttaa
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