Syngnathus scovelli (Gulf pipefish): 125975402
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Entry
125975402 CDS
T08785
Symbol
mindy3
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125975402 (mindy3)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125975402 (mindy3)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
125975402 (mindy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
125975402
NCBI-ProteinID:
XP_049586928
LinkDB
All DBs
Position
9:3666956..3679376
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AA seq
456 aa
AA seq
DB search
MSDLNKELVDLVWGRPTTGAVSASIFRRWTQGFVFSEHEHTALEQFEGGPCAVIVPVQAF
LLKTILFNRETSNWRHMTEEEQKTVLCFALSEILESACSSSSMGFCLVSWAKGQSPPVCT
HTKAQTQSQTQDIPVPESSQPLEGEQPTALAAEDLGFERFHSVLQKRVVMSVSDLQAEVL
SLFHTWRGCCGVLLFLYSVILTKGIENIKNEIQDTLEPLIDPVHGHGSQSLVNLLVTGHA
VSNVWDGDRECSGMKLHGIHKQASVGFLTLMESLRYCKVGTFLKSPKFPIWIIGSETHLS
VFFTKEMSLVGPESPSEQARRVFQSFDPEDNGFIPDSLLQDVMKSLDLVSEPDYVSLVKN
KLDPENLGIILLGPFLMEFFPDQDSGIPDSFPVYHYNGLKQSNHNERVEYVEGTALVLGF
EDPMVRTDDTPVKRCLQTKWPYIELLWTTERSPSLN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttaaataaagagctggtggatttagtgtgggggagaccaacaacaggggca
gtttcagcctctatttttcgcagatggacccaagggtttgtgttcagtgagcatgagcac
acagctctggagcagtttgaaggggggccatgtgctgttattgtacctgtgcaggccttc
ctcttgaagactattctctttaatcgagagacttcaaactggagacacatgacagaggag
gagcagaaaacagtcctgtgctttgccctgagtgaaattctggaatcagcctgttccagc
tcctccatgggcttctgccttgtgtcgtgggctaagggacagagcccacctgtctgcacg
catacgaaagcacagacccagtcgcaaacgcaggacatcccagtgccagagagcagccaa
ccactagagggggagcaacccactgctttggctgctgaagaccttggctttgagcgattt
cacagtgttcttcaaaagcgagtggtgatgtctgtgtcagatctccaagctgaggtgttg
tctctcttccatacctggaggggttgctgtggagttttgcttttcctctactctgtcatc
cttactaaggggattgagaacattaaaaatgagatccaggatacattggaaccacttata
gacccggtacatggccatggaagtcagagtttggtgaacctccttgtaacgggccatgcc
gtctctaatgtctgggatggagaccgagaatgttctggaatgaaacttcatggaattcat
aagcaagcatcggttggcttcctcacgctcatggagtcactccgctactgcaaggtgggg
actttcctaaaatcgcccaaattcccaatatggatcattggcagcgaaactcacctttca
gtttttttcacaaaggagatgtccctggttggtccagaaagtccatcagagcaggcaagg
agggtcttccagtcatttgatcctgaagataacggcttcatcccagattctctgctgcag
gatgtgatgaaatcccttgaccttgtctccgagccagattatgttagtctggtgaagaac
aagctggatccagaaaacctgggtataattcttctgggcccgttcctcatggaattcttt
cctgatcaggattcaggaatcccggactcgtttcccgtgtaccactacaacggactcaaa
cagtccaaccacaacgaaagggtcgagtacgtggaaggaacggctctggtgctcgggttc
gaggaccccatggtacggaccgacgacactccagtcaagcgttgcctacagaccaagtgg
ccctacatcgagctgctgtggaccaccgagcgctcgccgtcactcaactag
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