Syngnathus scovelli (Gulf pipefish): 125975428
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Entry
125975428 CDS
T08785
Name
(RefSeq) transcriptional repressor scratch 1
KO
K09219
scratch
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125975428
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
125975428
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
DUF7479
zf-BED
zf-C2H2_11
zf-C2H2_15
HypA
zf-C2HC_2
DUF7565
DUF7351
Zf-C2H2_ZNF451
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
125975428
NCBI-ProteinID:
XP_049586970
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All DBs
Position
9:3471139..3475987
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AA seq
280 aa
AA seq
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MPRSFLVKKVKLDDFSPADDLESAYRPRTELSLRLHDKAGYISDYISPSAYDGESDGGIK
VPSPDPLYDGIHSDYGAPDSESPDSPGSELTDGYINGDAAVSDGYSVDAFYITDGRSRRK
AMGSPRSIQRHTCNECGKTYATSSNLSRHKQTHRSLDSKLAKKCPTCGKVYVSMPAMAMH
LLTHDLKHKCDVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSA
FKHFKCKRCNKTFALKSYLNKHYESACFKGPFSPLGPLDA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtctttcttggtgaaaaaggtgaaattggatgatttctcccccgcggatgat
ttggagagcgcctaccggcccaggacggagctcagcctgcggctacatgacaaagccggc
tacatcagcgactacatcagcccgtcggcgtacgatggcgagagcgacggcgggatcaag
gtgccctcgccggaccccctctacgacggcatccacagcgactacggcgccccggactcg
gagtctcccgacagcccgggctcggaactcaccgacggctacatcaacggcgacgcggcg
gttagcgacggctactcggtggacgccttctacatcacggacgggcgctccagaaggaaa
gccatgggcagcccgcgcagcatccagcggcacacctgcaacgagtgcggcaagacctac
gccacctcgtccaacctgagccggcacaaacagacgcaccgctcgctggatagcaagcta
gctaaaaaatgccccacctgcggcaaggtgtacgtgtccatgcccgccatggccatgcac
ctgctcacgcacgacctcaaacacaagtgcgacgtgtgcggcaaagccttcagccggccg
tggctcttgcagggtcacatgcgctcgcacacgggcgagaagcccttcggctgcgcccat
tgcggcaaagccttcgcggaccgctccaacctgcgcgctcacatgcagacgcactcggcc
ttcaagcacttcaaatgcaaacgctgcaacaagaccttcgcgctcaagagttacctgaac
aagcactacgagtcggcttgcttcaaaggccccttctctcctctcgggcccctggatgcg
tga
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