Syngnathus scovelli (Gulf pipefish): 125975440
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Entry
125975440 CDS
T08785
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125975440 (wdr18)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
125975440 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_alt
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_Nup120_160
WDR54
Beta-prop_IP5PC_F
Ge1_WD40
DUF5745
DUF6752
Motif
Other DBs
NCBI-GeneID:
125975440
NCBI-ProteinID:
XP_049586993
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Position
10:12929836..12933046
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AA seq
428 aa
AA seq
DB search
MSAPLEVVVSSDASSQLWNVSVFDLHSGSSLLSYRGGNSSPRTLCLLNGQYLLSAQLAKN
FINIWEIHRKEQLQQKIICPGVVTCISASADGIFLGAGVAEAVYLWEVSTGKLLSVVTRH
YQDVTCIKFTDDGSHFVSGGKDSVVLVWSLSSVIQVDLSHAPEPRHILSHHSLPITDLHC
GMMGAQARVATASLDQTVKLWELSSGELLLSVLFDVELMSVTLDPCEHYLFCGGSDGNIF
QVSLSTQSAPADNSFQCDTDAKRTFKGHRKMVTCLSVSMDGTLLVSGSHDESVRLWDIQS
KQCVRCFAHKGPVTNASITVAPANMFLPDSRPAVPLPRFSRHQLENDGGRSGEVCVRLGL
HAQKEEPAYLQKADRLASLMNGVTDRLLLGDGENGHARVAELEEEVQTLKKVNKELYDFS
SHLLTKAT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccccgttggaggttgtagtgagcagcgacgccagctctcagctttggaacgtg
tccgtgttcgacttgcacagcggctccagcctgctttcgtaccgcggcggcaacagctcg
ccccgaacgctgtgccttctcaacggccagtacctgctgtccgcgcagctggccaaaaac
tttatcaacatctgggagatccacaggaaggagcagcttcagcagaaaataatttgtcca
ggcgtggtcacatgtatcagtgcctccgcagacggcattttcttgggggccggtgtggcc
gaagctgtgtatttatgggaggtgtccacaggcaagctgctgtccgtggtcacgcgtcac
taccaggacgtcacctgcatcaagtttacggatgatggcagccattttgtttctggcggg
aaagacagtgtggttttggtgtggagtcttagcagtgtgatccaggtggacctaagccac
gcccctgagcctcggcacatcctctctcatcactctctgccaatcacagacctccactgt
ggcatgatgggagctcaggcccgagtcgccacagcgtccttggaccaaacagtaaagctg
tgggagctgtcttcaggagagctcctcctctcagttctctttgatgtagaactcatgtct
gtgacccttgacccctgcgaacactacctgttttgcggcggcagcgacgggaacatcttc
caggtttctctgagtactcagagtgcgccggccgataactcgttccagtgcgacaccgac
gcaaagcggaccttcaagggtcacaggaagatggtcacctgcctgtctgtgtccatggat
ggaacgctcctggtgtcgggatcccacgatgagtcagtgcgactgtgggacatccaaagc
aaacaatgcgtccgttgctttgctcacaaaggcccagtgaccaatgccagcatcacggtg
gctcctgccaacatgttcctccccgactcgcgacccgccgtgcccctgccgcggttcagc
cgccaccagctggagaacgacggcggccggtcaggcgaagtgtgcgtccgcctcggactc
cacgctcagaaggaagagccggcctacctgcagaaagccgacaggctggcttccttgatg
aacggcgtgaccgacaggctgcttttgggagacggcgagaacggccacgcacgtgtggcc
gagttggaggaggaagttcagacgctgaagaaagtcaacaaagagttgtacgacttttcg
agtcatctgctgacaaaagccacgtga
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