KEGG   Syngnathus scovelli (Gulf pipefish): 125975440
Entry
125975440         CDS       T08785                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sscv03009]
    125975440 (wdr18)
Ribosome biogenesis [BR:sscv03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    125975440 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_alt EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WDR55 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_Nup120_160 WDR54 Beta-prop_IP5PC_F Ge1_WD40 DUF5745 DUF6752
Other DBs
NCBI-GeneID: 125975440
NCBI-ProteinID: XP_049586993
LinkDB
Position
10:12929836..12933046
AA seq 428 aa
MSAPLEVVVSSDASSQLWNVSVFDLHSGSSLLSYRGGNSSPRTLCLLNGQYLLSAQLAKN
FINIWEIHRKEQLQQKIICPGVVTCISASADGIFLGAGVAEAVYLWEVSTGKLLSVVTRH
YQDVTCIKFTDDGSHFVSGGKDSVVLVWSLSSVIQVDLSHAPEPRHILSHHSLPITDLHC
GMMGAQARVATASLDQTVKLWELSSGELLLSVLFDVELMSVTLDPCEHYLFCGGSDGNIF
QVSLSTQSAPADNSFQCDTDAKRTFKGHRKMVTCLSVSMDGTLLVSGSHDESVRLWDIQS
KQCVRCFAHKGPVTNASITVAPANMFLPDSRPAVPLPRFSRHQLENDGGRSGEVCVRLGL
HAQKEEPAYLQKADRLASLMNGVTDRLLLGDGENGHARVAELEEEVQTLKKVNKELYDFS
SHLLTKAT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgtcggccccgttggaggttgtagtgagcagcgacgccagctctcagctttggaacgtg
tccgtgttcgacttgcacagcggctccagcctgctttcgtaccgcggcggcaacagctcg
ccccgaacgctgtgccttctcaacggccagtacctgctgtccgcgcagctggccaaaaac
tttatcaacatctgggagatccacaggaaggagcagcttcagcagaaaataatttgtcca
ggcgtggtcacatgtatcagtgcctccgcagacggcattttcttgggggccggtgtggcc
gaagctgtgtatttatgggaggtgtccacaggcaagctgctgtccgtggtcacgcgtcac
taccaggacgtcacctgcatcaagtttacggatgatggcagccattttgtttctggcggg
aaagacagtgtggttttggtgtggagtcttagcagtgtgatccaggtggacctaagccac
gcccctgagcctcggcacatcctctctcatcactctctgccaatcacagacctccactgt
ggcatgatgggagctcaggcccgagtcgccacagcgtccttggaccaaacagtaaagctg
tgggagctgtcttcaggagagctcctcctctcagttctctttgatgtagaactcatgtct
gtgacccttgacccctgcgaacactacctgttttgcggcggcagcgacgggaacatcttc
caggtttctctgagtactcagagtgcgccggccgataactcgttccagtgcgacaccgac
gcaaagcggaccttcaagggtcacaggaagatggtcacctgcctgtctgtgtccatggat
ggaacgctcctggtgtcgggatcccacgatgagtcagtgcgactgtgggacatccaaagc
aaacaatgcgtccgttgctttgctcacaaaggcccagtgaccaatgccagcatcacggtg
gctcctgccaacatgttcctccccgactcgcgacccgccgtgcccctgccgcggttcagc
cgccaccagctggagaacgacggcggccggtcaggcgaagtgtgcgtccgcctcggactc
cacgctcagaaggaagagccggcctacctgcagaaagccgacaggctggcttccttgatg
aacggcgtgaccgacaggctgcttttgggagacggcgagaacggccacgcacgtgtggcc
gagttggaggaggaagttcagacgctgaagaaagtcaacaaagagttgtacgacttttcg
agtcatctgctgacaaaagccacgtga

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