Syngnathus scovelli (Gulf pipefish): 125975491
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Entry
125975491 CDS
T08785
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125975491 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125975491 (prpf31)
Spliceosome [BR:
sscv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125975491 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
125975491
NCBI-ProteinID:
XP_049587064
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Position
9:complement(11095937..11099404)
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AA seq
508 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYAEGEEGDSDGEASQARNDGGLEDIPEEMEVDYSKADS
VAAIAKLRNSKQFSDIMEKISVYVGKQRKISEVSGPVEADPEYRLIVAANNLTVEIDNEL
SIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGSLLNDVELNQLEESCDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQTLPPDL
RRKAARLVSAKCTLAARVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFVKVKKESKN
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcagacgagcttctggcagacttggaggaggcaggcgacgaaggtgaggat
ggcctgtatgcagaaggagaggaaggcgacagcgacggcgaagcctcgcaggcgaggaat
gatggcgggctggaggacatccccgaagagatggaagtggactacagtaaagcggacagt
gtcgcagccattgctaaactccgtaacagcaaacagttttcagatatcatggagaagata
tcagtatatgtcggaaagcagcgcaagatttcagaggtatcaggccccgtggaggctgac
ccagaatacagactcattgtggcggccaataacctgacagtagagatcgataacgagctc
agtatcattcacaagtttacacgtgacaaatactcaaagaggttccctgagctggagtct
ctggtgcccgattctttggattacatccgcacggtcaaggagctgggcaacaacctggag
aaatgcaagaacaacgagactttacagcagatcctcaccaatgcgaccatcatggtcgtg
agtgtcacagcctccaccacgcaggggtctctgctgaacgatgtggagctgaatcagctg
gaggagtcgtgcgacatggccctggagctcaaccagtccaagcacaggatctacgagtat
gtggagtccaggatgtcattcatcgctcccaatctctccatcatcgtcggagcgtctaca
gccgccaagatcatgggtatcgccgggggcctgaccaacctgtccaagatgcccgcctgc
aacctgatgctgctgggagcgcagaggcggacgctgtcaggcttcagcagcacctccctg
ctgccccacactggcttcatctaccactgcgacgtggtgcagacgctaccccccgacctg
aggaggaaggcggcccgtttggtgtctgccaaatgcacgttggctgcaagagtggacagt
tttcacgagagctctgacggcaaggtcggttacgacctgaaagaagaaatcgagaggaag
ttcgacaagtggcaggagccgccgcccgtcaagcaggtcaaaccgctgcccgctcctctg
gacggccaaaggaagaaaagaggagggaggcggtatcgaaagatgaaggagcgtctgggc
ctgactgagatcaggaaacatgccaacaggatgacctttgctgagatcgaggacgacgcc
taccaggaggacctgggcttcagtctgggtcagctgggcaagagcggcagcggtcgcgtc
aggcaggcgcaggtcaatgatgccaccaaggccagaatctccaaatccctccagaggact
ttgcagaagcagagcatgacgtacggcggcaagtccacggtgagagatcgctcgtctggg
accagctccagcgtggccttcactcctctacagggcctggagatagtcaacccacaagct
gcagagaaaaaggtggctgaagccaaccagaagtatttctccaacatggccgaattcgtc
aaagtcaagaaggaatccaagaactga
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