Syngnathus scovelli (Gulf pipefish): 125975497
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Entry
125975497 CDS
T08785
Symbol
ago3a
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125975497 (ago3a)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125975497 (ago3a)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125975497 (ago3a)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125975497 (ago3a)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125975497 (ago3a)
microRNA pathway
RISC loading complex
125975497 (ago3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
125975497
NCBI-ProteinID:
XP_049587072
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All DBs
Position
9:10805755..10823908
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AA seq
867 aa
AA seq
DB search
MEIGTTGAVGAQSLFAMPRRPGYGTMGKPIKLLANCFQVEIPKMDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVAPTGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGHSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYDADPFVQEFQFKVRDEMAHVTGRVLPAPMLQ
YGGRVSTEHFMNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREDILKAFTD
QLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVI
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQ
FYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHH
TRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSG
QSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaactacaggagccgttggggcccagtccctgtttgccatgcctcggcgg
cccggctacggcaccatgggcaagcccatcaagctgctggccaactgcttccaggtggag
atccccaagatggacgtctacctttacgaggtggacatcaagcctgacaagtgcccgcgg
cgagtcaaccgggaggtggtcgactccatggtgcagcacttcaaggtgaccatctttggg
gatcgcaggccagtctacgatggcaagaggagtctgtacacggccaacccgctgcctgtg
gcgcccacgggggtggacctggatgtcactctaccgggcgaggggggcaaagatcgtccc
ttcaaggtgtccatcaagtttgtgtctctggtgagctggcacatgctgcacgaagtgctg
acgggtcacagcatgcccgagccgctggagctggacaagcccatcagcaccaatcctgtg
cacgccgtggacgtggtgctgagacacctgccgtccatgaaatacacgccggtgggccgc
tccttcttctcggctccggagggctatgatcaccccttgggcggaggcagggaggtgtgg
ttcggcttccaccagtcggtgcgccccgccatgtggaagatgatgctgaacattgatgtg
tccgccaccgccttttacaaggcccagccggtcatccagttcatgtgcgaagtgctggac
atccacaatatagacgagcagccgcgccctctcaccgactcgcaccgggtcaagttcacc
aaagaaatcaaaggtttgaaggttgaagtgacgcactgcggaaccatgcggaggaagtac
cgcgtttgcaacgtgacccgccggccggccagccatcaaacgttccccctccagctggag
aatggccagactgtggagcgcaccgtagcccagtatttcagggagaagtacagcctgcag
ctcaagtatccccacctgccctgtctgcaggtgggccaggagcagaagcacacctacctg
cccctggaggtgtgtaacattgtagccggtcagcgatgtatcaagaagctgacagataat
caaacatccaccatgatcaaggccacggctcgctctgcgcctgacagacaggaagagatc
agcaggctggtacgcagcgccaactacgacgccgaccctttcgtgcaggagttccagttc
aaagtgcgcgacgagatggctcacgtgacggggcgagtgctacccgcccccatgctgcag
tacggcggcagggtgagcacagagcactttatgaaccgcacagtggccacgcccagtcac
ggggtgtgggatatgaggggcaagcagtttcacaccggtgtcgaaatcaagatgtgggcc
atcgcctgcttcgcaacgcagcgccagtgtcgggaagacattctcaaggcgttcacggac
caactacgcaagatctccaaggacgccggcatgcccattcagggccagccgtgcttctgc
aagtatgcgcagggagcggatagcgtggagcccatgttcagacacctgaagaacacctac
gccggattacagctcatcatcgtcattctgcctggcaaaactcccgtctacgcggaggtg
aagcgcgtgggagacacgctgctgggcatggccacgcagtgcgtccaggtgaagaacgtg
gtcaagacgtcccctcagaccctctccaacctctgcctcaagatcaacgtcaagctgggg
ggcatcaacaacatcctggtgccacaccaaaggccgtcagtgtttcagcagccagtcatc
ttcctgggagccgatgtaacacatccgcctgccggggatggcaagaagccctccattgct
gcagtggtgggcagcatggacgcccaccccagccgctactgcgccaccgtgcgggtgcag
aggcccaggcaggaggtgatccaggatctggcctcgatggtgcgcgagctgctcatccag
ttctacaagtccacgcgttacaagcccacccgcatcattttctacagggacggagtttct
gaaggccagttcagacaggtgctgtattacgagctgctggccatccgcgaggcctgcatc
agcctggagaaggagtaccagccgggtatcacctacatcgtggtgcagaaacgccaccac
acgcgcctcttctgcgccgaccgcaacgagcgagtcggacgcagcggaaacattcccgct
ggtacgacggtggatacggacatcacgcatccttacgagtttgacttttacctctgcagt
cacgctggaatacagggcaccagccggccctcgcactaccacgtgctgtgggacgacaac
tgtttcacggctgacgagttccagctgctcacctaccagttgtgccacacctatgtgcgc
tgcacccgctcggtgtccatccccgcgcccgcatactacgcccacctggtggccttccgc
gcccgctaccatctggtggacaaagaacacgacagcgccgagggcagccacgtgtcaggt
cagagtaatggtcgagacccgcaggcactggccaaagctgtccaaatccaccatgacacc
ctgaggaccatgtacttcgcttga
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