Syngnathus scovelli (Gulf pipefish): 125975498
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Entry
125975498 CDS
T08785
Symbol
ago1
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125975498 (ago1)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125975498 (ago1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125975498 (ago1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125975498 (ago1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125975498 (ago1)
microRNA pathway
RISC loading complex
125975498 (ago1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
125975498
NCBI-ProteinID:
XP_049587074
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All DBs
Position
9:10793185..10805445
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AA seq
866 aa
AA seq
DB search
MEPGPSGTVPMGVFPPPLQQVFHAPRRPGMGTVGKPIKLLANYFEVEIPKMDVYHYEVDI
KPDKCPRRVNREVVEYMVQHFKPQLFGDRKPVYDGKKNIYTVLALPIGSEKVDFEVTIPG
EGKDRIFKVSIRWLAKVSWRLLQETLVSGRLQVPLDSVQALDVAMRHLASMRYTPVGRSF
FSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIR
NIDEQPKTLTDSQRVRFTKEIKGLVYPASPGLKVEVTHCGQMKRKYRVCNVTRRPASHQT
FPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCI
KKLTDNQTSTMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDDMAEVTGRVL
PAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQ
LRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVK
RVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIF
LGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQF
YKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHT
RLFCADKSERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNR
FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHVSGQ
SNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggaccgtctggcactgtgcccatgggggtcttccccccacccctacagcag
gtgttccatgccccgcgtcggccaggaatgggcactgtgggcaagcccatcaaactgctg
gccaactacttcgaggtggagatccccaagatggacgtctaccactacgaggtggacatt
aagccggacaagtgcccgcggcgagtcaaccgggaagtggtggagtacatggtgcagcac
ttcaagccacagctctttggcgaccgcaagcccgtgtacgacggcaagaagaatatctac
acggtgctggcgctgcccatcggcagtgaaaaggtggatttcgaggttaccatcccaggg
gagggcaaggaccgaatcttcaaggtgtccatccgttggctggccaaggtgtcatggcgc
ctgctgcaggagacgctggtcagcgggcggctacaggtgcccctcgactctgtgcaagcc
ctggacgtggccatgcgtcacttggcctctatgaggtacactcctgtgggccgctcgttc
ttctccccgccagaaggttactaccaccctctgggcggtggccgggaggtatggttcggc
ttccaccagtcggtgcggcccgccatgtggaagatgatgctcaacatcgacgtgtctgcc
accgccttctacaaagcccagcctgtcatcgaattcatgtgcgaagttctggacatccgc
aacatagatgagcagcccaaaacgctcaccgattcgcagcgggttcgcttcaccaaagag
atcaaaggtctcgtataccccgcttcgccaggcctcaaggtggaagtgacccactgtggg
caaatgaagaggaagtaccgtgtatgcaatgtcacccgacgtcctgccagccatcagacg
ttccccctccagctcgaaagcgggcagaccgtagaatgcactgttgcccagtacttcaag
cagaagtacaacctgcagttaaaatacccccacctgccctgcctgcaggtggggcaggag
cagaagcacacatatctgcccctagaggtgtgcaacatcgtggcgggccaaagatgcatc
aagaagctgacggataatcagacgtccaccatgatcaaagcgactgctcgctcggcgccc
gatagacaggaagagatcagccggctgatgaagaacgccaacttcaacctcgacccctac
atccaggaatttggcatcaaggtgaaggacgacatggctgaagtaacgggcagagtgctt
ccagccccgatcctgcagtacggaggacggaaccgagccatagccaccccaaatcagggc
gtgtgggacatgcggggcaagcagttctacaatggcatcgagatcaaagtgtgggccatt
gcctgctttgccccgcagaagcaatgcagagaggaggtgctgaagaacttcacggaccag
ttacgcaaaatctccaaggacgccggcatgcccatccaaggccagccgtgcttctgcaag
tacgcgcagggagcggacagcgtggagcccatgttcagacacctgaagaacacctactcg
gggctacagctcatcattgtcatcctgcccgggaaaactcccgtctacgcggaggtaaag
cgcgtgggagacaccctgttgggcatggccacgcagtgcgtgcaggtgaagaacgtggtc
aagacgtcccctcagaccctctccaacctttgcctcaagattaacgtcaagctgggaggc
atcaataacatcctggtgccgcaccaaaggtcagcggtgttccagcagccggttatcttc
ctgggagctgatgtgacgcaccctcctgctggagacggcaagaaaccctccatcactgcc
gtggtgggcagcatggacgcccaccccagccgctactgcgccaccgtgcgggtccagcgg
cctcggcaggagatcatcgaggatctgtcctacatggtgcgcgagctgctcatccagttc
tataagtccacccgcttcaagcccaccaggatcatcttctacagggacggcgttccggaa
ggccaactgccgcagattctccactatgagctgctggccatcagggacgcctgcatcaag
ctggagaaggactaccagcccggcatcacttacattgtagtgcagaagcgccatcacacg
cgcctcttctgtgccgacaaatctgaaaggatcggaaaaagcgggaacatacccgctggc
actacagtggacaccagcatcactcacccctttgagtttgacttctacctgtgtagccac
gcaggcatacagggtacgagccggccgtcgcattattacgtcttgtgggatgacaatcgt
ttcacggccgacgagttgcagatcctcacctaccagttgtgccacacctacgtacgctgc
acccgctcggtgtccatcccggcgccggcctactacgcccgcctcgtggccttccgcgcc
cgctaccatcttgtggacaaagagcacgacagcggggagggtagtcacgtgtcaggtcag
agtaacggccgggacccccaggcgctcgctaaagcggtccaaatccaccacgacaccctg
aggaccatgtacttcgcctga
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