Syngnathus scovelli (Gulf pipefish): 125975512
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Entry
125975512 CDS
T08785
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125975512 (ptprub)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125975512 (ptprub)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125975512 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
ig
DSPc
Ig_DSCAM-DSCAML_C
Tc-R-P
Pur_ac_phosph_N
Y_phosphatase3
Ig_3
PTPlike_phytase
Ig_2
PTP_tm
Motif
Other DBs
NCBI-GeneID:
125975512
NCBI-ProteinID:
XP_049587126
LinkDB
All DBs
Position
9:complement(4459942..4578883)
Genome browser
AA seq
1449 aa
AA seq
DB search
MNTCAFLLILTVQISADGIEGPTAAGCTFEEDSDPSLCDFAQSEDDDFDWQLFRAHNSPY
AGSDLLRGSYMLVNSSQHVAGHCAQLLLQSLSENDTHCVQFSYFLYSRDGHSPGSLKAYV
RVNGGPLGNPVWNTSGSHGKQWHQMELAVSTFWPNEYQVLIEATVSTERQGYIAIDDIMV
LNYPCYKAPHFSRLGDEEVNAAQNATFQCVAAGKASEADKFLLERHNGEIITSATVKHLS
HRRFVVSFQLDSVQRSDQDLYRCITQSPKGSGVSNFAELIVKVPPSPIAPPQLLRAGSTY
LIVQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVTYKLWHLDPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRALRGLTATDIQPRQLSLLWENLAFNVTRCHTYSVSL
CYRYTTAGGGGGHNTTVRECLAVEHNASRFTLRDLPPYHGIHVRLSLANPEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPLEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLKNETYHMFSNLHPGTTYLISVRARTGKGFGQTALTEITTNISAPTFDYGDIP
SPLSETENTITVVLRPAQGRGAPVSTYQVVVEEETVKKVKRELGLQECFPLPMSHGEALA
RGTPHYYTAELPPSSLPEASPFTVGDNHTYNGYWNTPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKAACKDHRKALEVSQSSEEMGLILGVCVGGLVVLILLLGAVIIIIKKGRNYYS
YYPKPVNMNKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDAHTCGTRSDPRSS
VNEASSLLGGSPRHPCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFF
DGWDCTKKKDKTKGRHDTLLGYDRHRVKLNPLLGDPNSDYINANYIDIRINREGYHRSNH
FIASQGPKQETLYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDDSEMYGDIKITLL
KTETLAEYTVRTFALERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPD
AGPVVVHCSVGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFI
HDAILEACLCGETAILVNEFAVAYRELLRVDSQSNSSQLREEFQTLNSVTPHLDVEECSI
ALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALADSFHQQAAFIVTPHPLPGT
TADFWRLVFDYGCTAVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMEVEFLSMSADEDVI
TRLFRVKNVTRLQEGQLVVCQFQFLRWSPYRDVPDSKKAFLNLLAQVHKWQRECGEGRTV
VHCLNGGGRSGSFCACNILLEMIQYQNMVDIFYAVKTLRNCKPNMVESLDQYRFCYDLIL
EYLDCFEGR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgcctttttgttgattctcaccgtgcagatctccgccgatgggatcgag
gggccaacagctgctggatgcacatttgaagaggattcagatcccagtctgtgtgacttt
gcacagagtgaagatgatgactttgattggcagttgttccgggcacacaattctccatac
gccggttcagacctcttgcggggttcctacatgttggtcaactcctcgcagcacgtagcg
ggccattgcgctcagctgttgctgcagagtctgagtgagaacgacacgcactgcgtccag
ttcagctacttcctgtacagccgcgatggccacagtccagggagcctaaaggcatacgtg
cgtgtcaatggcggtccgttgggcaacccggtgtggaacacgtcgggatctcacgggaaa
cagtggcatcagatggagctggctgtcagcaccttctggccaaatgaatatcaggttctg
attgaggctacagtttccacggagcgacaagggtacattgctatcgatgacatcatggtg
ctcaactatccttgctataaggcaccgcatttctccaggcttggggacgaggaggtgaac
gctgcacaaaatgcaactttccagtgtgtggctgctggaaaggcttccgaggctgacaaa
tttcttctggagagacacaacggggagattataaccagtgcgacggtcaagcacctaagt
caccggcgttttgtggtatcgttccagctagacagcgtccagaggtcagatcaagacctt
taccgctgcatcacgcaatcccccaagggatcgggggtctcgaactttgcagaactcatc
gtaaaagtaccaccttcccctatcgcgccacctcagctgctgcgtgctggctccacttac
ctaatcgtccagctcaacaccaattccatccttggagatgggcccattattcggaaagag
attgagtatcgcgccagccagtctccatggtccgaggtgcacggagtgaacatggtgacc
tacaagctgtggcacctggatcccgacaccgaataccacatcagtgtgctgttgactcgg
ccgggagaaggaggtacaggcccacccggacctccgctagtcagcaggaccaagtgtgct
gagcccatgcgtgcactacgaggcctgacagccacagacatccaacccaggcagttgtcc
ctgctgtgggagaacttagccttcaacgtgacacgctgccacacctactcagtgtccctt
tgctaccgctacacaacagcgggaggcggcggcggccacaacaccaccgtgcgtgaatgc
ctagccgtggagcacaacgcctcacgcttcacgctgcgtgatctgccgccctaccatggc
atccatgtccgtctgtcactggccaacccggagggcaagaaagagggcagagaggtcacc
ttccagactgaggaagacatcccaggaggcatagcaccagagtcgctgaccttcacccca
ctggatgacatgatcttcctgaagtgggaggagccacttgagcccaacggccttattacc
cagtatgagattagttaccagagcatcgagtcgtctgatcccggcatcaacgtcccagga
ccaagaagaaccgtctccaagctaaagaacgagacctatcacatgttctccaatcttcac
ccaggaaccacctacttgatctctgtgcgagctcgtacggggaaaggctttggccagacg
gccctgactgaaatcaccacaaacatctcggcgcctacattcgattacggagacattcca
tcccccttgagtgaaaccgagaacacaataactgtcgttctgcgccctgcccaaggaagg
ggcgcccctgtcagcacataccaagtggtggtcgaggaagagactgtgaagaaagtgaag
agggagctggggcttcaagagtgtttccctctaccgatgtcccacggtgaggccttggcc
cggggcaccccgcactactacaccgctgagctaccacccagcagcttgccagaggccagt
cccttcactgtgggggacaatcatacttacaacggttactggaatacgcctttggaccca
cgcaaaagctaccttgtctacttccaggctatgagcaacttcagaggggaatcaagaata
aactgcatccgcattgctcgcaaagccgcctgcaaagaccatcgcaaagctttggaggtg
tcccaaagctcggaggagatgggactgattctgggagtgtgtgtcggtggcctggtggtg
ctcattcttctgctgggtgctgtcatcattatcattaagaaaggaaggaactactactct
tattatccgaaacctgtgaacatgaacaagacgccgattacttatcgccaggagaagagc
cacatgggctccatggagcgtagtttcaccgaccagagcactttgcaagaagatgagagg
atggctctctccttcatggatgcacacacttgtggaacccgaagtgatcctcgcagttcg
gtgaacgaggccagtagtctgctgggaggctccccgaggcacccgtgtggacgcaaaggc
tccccctatcacacggggcagctgcacccggccgtccgtgtggccgacttgctccagcac
atcaaccagatgaagacggccgagggctacggttttaaacaggaatatgagagcttcttt
gatggctgggactgcacaaagaagaaagacaaaaccaaagggaggcatgacaccttactg
ggatatgatcgccacagagtcaaactcaaccctctcttgggagaccccaattccgactat
atcaacgccaactacattgatattcggattaacagggaaggctaccatcgatccaaccac
ttcatcgcatctcagggacccaaacaggagacactctatgatttctggaggatggtgtgg
caggagaattgtttcagcatcgtcatgatcactaaactagtggaagtcggccgggtgaaa
tgttgtaaatactggccggatgacagcgagatgtacggcgacatcaaaatcactctgctt
aaaacggagacacttgccgaatacacagtccgcacttttgccttggagaggagaggatac
tcaaccaagcatgaggtccgtcagtttcacttcacatcctggcccgagcacggggtgccc
tatcacgccactggtttgctcgcctttatacgaagggtgaaagcttcgacgccccccgac
gccggtcctgtcgtcgtccattgcagtgtgggggcgggccgcacgggttgctacattgtg
ctggatgtcatgttggacatggctgagtgtgaaggtgtggtggacatctacaactgcgtc
aaaactctctgctcacgacgcatcaacatgatccagacagaggagcagtatatattcatc
catgatgccattttggaggcctgtttgtgcggcgagacggccatcttggtcaacgagttc
gcggtggcctacagagagttactgagggtggattcccagagtaattcctcgcagctccgg
gaggaatttcagacactaaactctgtgactccacacttggatgtggaggagtgcagcatc
gccctgttgccccgaaaccgagaaaagaaccgcagcatggacgttctgccacccgatcgc
gccctggccttcctggtgacgacggaaggggagagcaacaattacattaacgccgctctg
gccgacagcttccaccagcaagctgcctttatcgtgaccccgcaccctttgccgggcacc
acggccgacttctggaggctggtcttcgactacggttgcacggccgtggtcatgctcaac
caactgaatcagtccaactcagcctggccatgtgtccagtactggcccgaacctggtcta
cagcaatatggacccatggaggtggagtttctctccatgtcagccgatgaagatgtcatt
actcgcctctttcgggtcaagaacgtcacaaggctgcaagagggccagctggtggtgtgt
cagttccaattccttcgctggtcgccatatcgggacgttcccgactccaagaaggcgttc
ctcaacctgctggctcaagtgcacaagtggcaaagagagtgtggagaaggccgcaccgtg
gtccactgccttaatggtggcggtcgcagcggatctttctgtgcctgcaacattctcctg
gagatgatccagtaccagaacatggtggacatcttctacgccgtcaagacacttcgcaac
tgtaaacccaacatggtggaatcgctggaccagtatcgattctgctatgacctcattctg
gagtacttggactgctttgaagggagatag
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