Syngnathus scovelli (Gulf pipefish): 125975530
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Entry
125975530 CDS
T08785
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125975530 (tcea3)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125975530 (tcea3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
125975530
NCBI-ProteinID:
XP_049587209
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All DBs
Position
9:4291574..4310327
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AA seq
703 aa
AA seq
DB search
MTREEELIRIAKKLEKMVSRNNTEGAMDLLNELKSFNMTLKLLQGTRIGMSVNSIRKHCT
DEDVIALAKVLIKDWKKLLDSSRPQMEKAAEEKNGLDSSKAEGSPNDSPRRLDIKQQLDS
LPDVNQPIKDKKRKHTDEPKNKMAHRYEHGDEKHHTKKRLKEIAKEGKKPRETEVNQLEK
KHKHEPDNAKEIREHKEPKRFNDLKPKEENRLERLMNTIPGEPANDVFREKSSGVQKPLF
ERRGVLDSSVLYPTRFPSPPRPARPPLPIRRPSVDTKKERKDGKDSSLGRSQASGLTSPK
AKRPSLDSKKERKVPKDPSTPWVPLTLKVHPPPPRLECCEDVTSGCDATDLLLKMSCPCR
KEPPDPNAPLPPLPFHLHPPPAPKRPSLDGKKERMDSSDSKIASQKTSDCVKRDRKDSLD
SKVAKKHSMDVKKERKNSLDSKLSQPVKHQTTPTKPERRESDSKHNSLSPRAKKLTSERR
ESHGSKATQSGPPQRKTSTDHNERKGKTEAPKTPTTPSSPLSPGFASTGGSLPPHLITGD
SIRDKCIEMLAAALRTDNDYKDFGTNCDSMAAEIEDHIYQEIKATDMKYKNRVRSRISNL
KDPKNPGLRRNVLAGSIDLNRIANMSAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTT
DLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggaggaagagttaatccggattgccaagaagctggaaaaaatggtgtctcga
aataacacggaaggggctatggacctgctgaatgagctcaaaagtttcaatatgacactt
aaactcctccaggggacaaggatcggcatgtctgtgaatagcatcaggaagcactgcaca
gacgaagatgtcatcgctttggcaaaagtactcatcaaggactggaaaaaacttttggac
tccagccgtcctcaaatggagaaagcggcagaagagaagaatggtttggactccagcaaa
gcagaagggtcaccaaacgactcacccaggagattggacatcaaacagcaactggattcc
ctacctgatgtaaatcagccaattaaagacaagaaaagaaaacatacagatgagcccaag
aataaaatggcgcatagatacgagcatggcgatgaaaagcaccatacgaagaaacgacta
aaagaaatagccaaagaaggtaaaaagccgagagagacagaagtcaaccagcttgagaag
aaacacaagcatgaaccagacaatgcaaaagagataagagagcacaaggagcccaaaaga
ttcaacgacttgaaacccaaagaggagaacagacttgagaggctgatgaacacaattcca
ggcgagcctgcgaacgacgtcttcagggagaaatcatcaggtgtccaaaagccattattt
gaaaggagaggagttctagacagcagcgttctctatcccacccgcttcccctcccctcct
cgacccgctcgtccccccctccccatcaggcgcccctctgtggatacgaagaaagagagg
aaggatggtaaagactcctcgttagggcgctctcaagcttcagggctcacctcgcccaag
gctaagcgcccttcactggactctaagaaagagaggaaagttccaaaagacccaagcacg
ccatgggttccacttactttaaaagtccaccccccaccaccaaggttagagtgttgtgaa
gatgtcacctctggctgtgacgcgactgacctcttgctcaagatgtcttgtccttgtaga
aaagagccgccagatccaaacgctcctctgcctccattgccttttcatcttcaccctcca
cctgcgccaaagcgcccctcgctggatggaaaaaaggagaggatggattcctcagactct
aaaattgcttcccagaagacatcagattgtgtgaaaagagacaggaaagacagtttggat
agcaaagtggctaaaaaacactcaatggatgttaagaaagaaaggaagaactcccttgac
tccaaattaagccagccagtgaaacaccaaacaactcccactaaaccagaaaggcgggag
tctgactcgaagcacaacagcctttcacctcgtgcaaagaagctaacatctgaaaggcga
gagtctcatggctcaaaggccactcagtccggacctccgcaaagaaaaacatccactgac
cacaatgaaagaaagggcaaaaccgaagccccgaaaactccaactacgccaagcagcccg
ttatcccccggcttcgcttccaccgggggttcattaccgcctcacctaattaccggagac
tcgattcgtgacaagtgcatcgagatgctggctgctgccctgcgcactgacaatgactac
aaagattttggaactaactgtgacagcatggcagcagagattgaagatcatatctaccaa
gagatcaaggccactgacatgaaatacaagaacagagtgagaagccgcatcagtaactta
aaggacccaaagaaccccggtctgcgcaggaacgttctcgcaggaagcattgatttaaat
cgcattgccaatatgagcgctgaggaaatggcgagtgacgagctgaaacaactgaggaac
gtcctcacccaggaggccatcagggagcaccagatggccaaaactgggggcaccaccact
gacctgctgcagtgcggcaagtgtaaaaagaagaactgcacatacaatcaagtgcagaca
cgtagcgctgacgagcccatgaccacatttgtcctttgcaacgagtgtgggaaccgctgg
aagttctgctga
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