Syngnathus scovelli (Gulf pipefish): 125975638 Help Entry 125975638         CDS       T08785                                  Symbol itga10 Name (RefSeq) integrin alpha-10   KO K06586   integrin alpha 10 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04510   Focal adhesion sscv04512   ECM-receptor interaction sscv04810   Regulation of actin cytoskeleton sscv04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125975638 (itga10)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125975638 (itga10)   09142 Cell motility    04820 Cytoskeleton in muscle cells     125975638 (itga10)    04810 Regulation of actin cytoskeleton     125975638 (itga10)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sscv04515]     125975638 (itga10) Cell adhesion molecules [BR:sscv04515]  Integrins   Integrin alpha subunits    125975638 (itga10) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 VWA_2 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3 vWA_SIBA-E Motif Other DBs NCBI-GeneID:  125975638 NCBI-ProteinID:  XP_049587386 LinkDB All DBs Position 9:complement(12112119..12128194) Genome browser AA seq 1192 aa AA seqDB search MPGCHCSTISLESTHLCTDDTTERMELRAYLLCLLCIFLLKGWCQCFNIDVTHPRIFGGP DDALFGFSVLQHEAEGEKSMLVGAPWDGRPGNRKGDVYKCSVTEESNSNCSKLDLGDAAF RNISKNLKNSHLGMTLTPDSPDGLLACAPLWSQECGTSMFSTGICASIGDDFQPREIIAP TARRCTTYMDIVIVLDGSNSIYPWYEVQSFLSNILSKFHISPDQMQVGILQYGEVAVHEW SLRDYQSTPEVVEAAKNISRQEGRETRTAHAINMACTEAFSAERGAREGATKVMIVVTDG ESHDGEELPDALLECESRNITRYAIAVLGHYHRRQQNPDTFINEIKYIASDPDDKYFFNV TDEAALNDIVDALGDRIFSLEGTLGNQSSFHMEMSQIGFSTHMLDDGILFGMVGAYDWDG GVLKEGTNGRIVPAREAFESEFPLELKNHAAYLGYTVSSVLVGDWRRLYVAGAPRFKHKG KVILFELSDNADVNIVQALNGEQIGSYYGSELCGVDVNQDRITDVLLVAAPMYLGSGNKE AGRVYIYTLSGEEFVSNGTLKSDEKSQDARFGYAMAVAPDLNHDGFTDLLVGAPLEDDHR GAVYVYHGQSIYINHRYKQRIAGMSVSPSLQYFGRSVSARLDLDGDGLIDLGVGAHGSAV LLRSRSIVQINVSLSFQPHSINVIQKTCQRGGRESACLDATACFTAMSRSPGPSSNGFDL WVAAMLDDRKLSARALFDDSSHRLTQLAVRAHTGQTLCYKLPFHVYDTADYIRPISFSLR FKINDTQSGPVLDEGWPTSVKKYIPFFKDCGEDDVCTTDLVIQAQMDISGTRHKPYVIRS PRRRMSVEVQLENRLENAYNTSLTLHYSRNLHFSSLSIREESNFKIECTGLGSNSHSCNV SYPVFRSQSKVNFMLEFEFSCATLNNRIQMKLNVASDSVERVDTLGDNSVQLQSFVQYEP DLFVSSDSNLNRYEVHPTRTMSEAIGPEFYTHFKLQNLGCYPVSNLELRLLLPSAAAEDQ VFMTVTDISSHNASAVNCSVTSDLATLKGRQKDVRPLHPEDMMENDVLNCSRSWCIEITC QVQQLQRGQAEVIRLSRRVHDDFFRKAKYKSARIVSMYHIAPGETNLITLATGTVWRETV LEVLKGRAIPISLWILIGSIIGGLLLLALIIFILWKLGFFARKHREDENQEE NT seq 3579 nt NT seq  +upstreamnt  +downstreamnt atgccgggatgccactgcagcaccatttcattggaatcgacgcatctctgcactgacgac accaccgaaaggatggagctgcgggcatacctgctgtgcctgctgtgcatcttccttctt aaaggctggtgccagtgcttcaacattgacgtgacgcatccgcggatcttcggcggtccg gatgatgcacttttcggcttctctgtgttgcagcacgaagcggagggagagaaatcaatg ctggtgggcgctccttgggacgggcggcccggcaacaggaaaggagacgtctacaaatgc agcgtgacggaggagagcaactccaactgcagcaagttggatttaggtgatgcggccttt cggaatatttcaaaaaacttaaaaaactctcacctgggaatgactctcacgccggactca cccgacggcctcttggcatgcgcgccactgtggtctcaggagtgcggcacgtccatgttc agcacgggcatctgcgcctccattggagacgacttccagccgcgagagatcatcgctccg acggcgcgacggtgcacgacgtacatggacattgtgatcgtgctggacggctccaacagc atctacccctggtatgaggtgcagagcttcctcagcaacatcctcagcaagttccacatc agcccggaccaaatgcaggtgggaatcctgcagtacggcgaggtggcggtccacgagtgg tcgctgagagactaccagagcacaccggaggtggtggaggctgccaagaacatcagccgc caggagggacgggagacacgcacggctcatgccatcaacatggcctgcacggaggcgttc agcgccgagcgaggtgcgagggagggcgccaccaaggtgatgatcgtggtgacggacgga gagtcgcacgacggcgaggagctgcccgacgctctgctcgagtgcgagagcagaaacata accagatacgccatcgccgtcctgggccactaccaccgaaggcaacagaaccctgacacc ttcatcaacgagatcaagtacatcgccagcgatccggacgacaagtacttctttaacgtg accgatgaagcagcgctcaacgacatcgtggacgctctgggagaccgcatcttctcactg gaaggcactctgggcaaccagagctccttccacatggagatgtcccagatcggcttctcc acccacatgctggatgatgggattctgtttgggatggtgggcgcttacgactgggacggc ggcgtgctgaaggagggcaccaacgggagaatcgtgcccgccagagaggccttcgagagc gagttccccctggagctgaaaaatcatgcagcatatctcggctacacagtgtcttctgtg ctggtgggtgattggaggaggctgtatgtggcgggcgcgccgcgcttcaagcacaaaggc aaagtcatcttgtttgagctcagcgacaacgccgacgtcaacatcgtgcaggccctcaat ggggaacagatcggttcctactacggcagcgagctgtgcggtgtggatgtcaaccaggac cgaatcactgatgttctcctggttgcagcacccatgtacctgggctccgggaacaaggaa gctgggagagtctacatctacacactcagtggggaggaatttgtctcaaacggtacgctg aaatcagacgaaaagtcccaagatgctaggtttggctacgcaatggccgttgctccggac ctcaaccatgacggattcactgacctactggtgggtgcccccttggaagatgaccatcgt ggggctgtgtacgtgtaccacggccaaagtatttacattaaccaccgctacaaacagcgt attgctggcatgtcagtgtccccgtccttgcagtattttggccgtagtgttagcgccagg ttggacttggatggagacgggctgatcgacttgggggtgggagcccacggcagtgccgtg ctgctcagatctcgaagcatcgtgcagatcaacgtcagtctgtccttccagccgcactcc atcaatgtcatccaaaagacgtgccagcgcggtgggcgagagtccgcctgccttgacgcc accgcctgtttcacggccatgtcccgctcccctggaccgagcagcaacggctttgatttg tgggtagcggcgatgttggacgacaggaagttgtcagcccgggcgctatttgatgacagc tcccacaggttgacccagctggcggtgcgggctcacacgggacagactctgtgctacaaa ctacccttccacgtttatgacacagcagactacattcgcccaatcagcttctcactgcgc ttcaagatcaacgacactcagagcggtcccgtgttggacgagggctggcccacatccgtc aagaaatacatccccttctttaaagactgcggggaggatgacgtgtgcaccacggattta gtcatacaggcccaaatggacatctctgggaccagacacaaaccttatgtgatccgcagt cctcgtaggcgtatgtccgtggaagtccaactggaaaacagactggaaaacgcctacaac accagcctgacgctgcactattcacgtaacctgcacttctccagcctaagtattcgggaa gaaagcaacttcaagattgagtgtacaggcctgggctccaacagtcactcgtgtaacgtc agctacccggtcttccgctcccagtccaaggtgaacttcatgctggaatttgagttcagc tgtgccaccctgaacaatcgaatccaaatgaagttgaatgtagccagcgatagtgtggag cgagtagacactttaggggacaacagtgttcagctgcagagctttgtccagtatgagccc gacttgttcgtcagcagtgattcaaatttaaaccgatatgaagtgcatcccacgcggaca atgtcagaagccattgggccagagttctacacgcactttaagctccagaacctgggttgt taccctgtgagtaatctggagttgaggctgcttttgccatcggcggctgcggaagaccaa gtcttcatgacggtcacagacatctcttctcacaacgcctcagccgtcaattgcagcgtc acaagtgatctggccacgctgaaaggccggcagaaagacgtgcgtccattgcaccctgaa gacatgatggagaacgacgtcctgaactgcagcaggtcgtggtgcatagagattacgtgt caagtccagcagctccagaggggacaagctgaagtcattcgcctcagccgcagagtccat gatgactttttccgaaaggccaaatataagtcagcgaggatcgtgagcatgtaccacatc gcacctggcgagaccaacctcatcaccttggcaacaggaacggtgtggcgagagactgtg ctggaggtgctgaaggggcgagctatccccatctcgctgtggattctcatcgggagcatc attggtggcttgctgctcctggcgctcatcatcttcattctatggaagctgggcttcttc gcgcgcaagcacagagaagatgagaaccaagaggagtga

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