Syngnathus scovelli (Gulf pipefish): 125975640
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Entry
125975640 CDS
T08785
Symbol
adamtsl4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23369
ADAMTS-like protein 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125975640 (adamtsl4)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
125975640 (adamtsl4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
PLAC
ADAMTS_CR_3
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
125975640
NCBI-ProteinID:
XP_049587391
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All DBs
Position
9:12197897..12216375
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AA seq
1110 aa
AA seq
DB search
MRLASVFRLFALWAFAEVVTSVSKPAKRKAAGRRSRQVLETEPVEGVWSTWAEWSSCSQS
CGVGVSQRSRKCLPPPPAPPSVSYPSPNWGGYFHPSPQLPPHHRAPDLNRGLPLYRNTPA
GGDDPPSPFYQTEYPATARNRVSVYRSPQRVPSPAYEQQQQRSIRRPGGRRSASTAREPL
PVRRSSSIRPGQFGYGKVPFSLPLHRPSRQARHTANGTISASSAPQLADDEGEEESATTA
APATTATPQPRARSEHRRVRVPPSPPHYLPRSLSSSSSSSSSSALSGHRRFDWRTVTAPP
PPLPAGSPHSQPAGASLAHASPLHRPLHRERTVHVGLGPRPPQAGNVYPLRHPMRPHVGE
EEGGFGAWRTAPNYRCTGPEKEYRRCFSQVCTGIPLDSRAEQCAAFNAKEFMDRLYDWEP
FTEVGPEKQCELTCRPVGYRFYVRQAERVRDGTPCFNVTSNDVCVQGQCQTEGCDGVLGS
GLALDKCGVCGGRDSACQKVTGSFQNVSVPLGYHKILDIPAGATFINITERRASPNYLAM
RSATGASVVNGRWAVDPPGEYRAGGTTFTYARPRAQAEGEDEPGESLRALGPTSAQLQLY
IIYHQQNPGIDYEFYIPVEKTESETPSERQSQGRAPLRAALGVTIDEPAPAAISPLSVPS
FPSTSSSSSLFVPPSSQHWAAGRSPPRASAPNRNARIPPRTDLPLDTQLPFAWRRGSLTP
CSASCGKGYQSREIICIDRHTEEQVPERKCDSAAKPAPEEEPCNTHGCPPFWEASAWSEC
SVSCGPGAQQRQLQCRQTFGNRSTMVHPQRCAGQVPPESTQACQLQLCSHWEVGSDWSTC
SVDCGVGKRTRSVRCVSDEGSVVNDMECSSRARPLGSEECNMGPCVTNWYSSAWSAACSA
RCGPGVQKREVVCLTRGGVREGQGAADCVADKPAELRACNGGPCVPVASWYSGPWTQCNV
RCGNGTQRRDVICVQKSGDEFTTLPSAQCTHEDKPAAVQECEMGDCQPQWFTTEWSACSR
SCGKGLQMREVRCLTSDRRHSPNCDAGAKPDQEQSCNSIPCGPQVTDENCRDRRHNCVMV
VQARLCVYSYYKTACCASCTHSAAQRAKRH
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgcgtctgtcttcaggctctttgcgctgtgggcctttgcagaggttgtgacc
tcggtgagcaagcctgccaaaaggaaggcggccgggcggaggtccagacaagtgttggag
acggagcccgtggaaggggtgtggtcgacgtgggcggagtggtcctcttgctcccagtca
tgcggagtgggcgtgtcgcagagaagcagaaagtgcctgccgcctccgcccgcccctcct
tccgtttcttacccatcacccaactggggtgggtatttccacccttcccctcaactgccg
ccccatcaccgggcacccgatctcaaccgagggctgccgctctaccgaaataccccggcg
gggggcgacgatccaccgtcgcctttctatcaaacggagtaccccgcaaccgctcggaac
cgagtgtctgtgtaccgatcgcctcagcgcgtgccctcgccggcttacgagcagcaacag
cagcgcagcatcaggaggcccggcggcaggaggtcggccagcaccgctcgggagcctttg
ccagtcaggaggtcttcatccatccgcccaggccagtttggctacggtaaagtccccttc
tccctgcctttgcaccggcctagtcgacaggctcgccacacggccaacggcaccatctcg
gcctcctcggcaccccaactggccgacgacgagggagaagaagagagcgcaaccaccgcc
gcacccgccactactgccacaccccaaccgcgcgccagaagtgagcacaggagggttcga
gttccgccctctccccctcactatctgccgcggtccctatcttcatcatcttcatcatca
tcatcatcagcattgtctggtcaccgccgctttgactggcgcaccgtcactgccccgccc
ccaccgctcccggctggctcgcctcactcgcagccggctggcgcctctttggcccacgcc
tcccctctgcatcggcccttgcacagagaaaggacggtgcacgtgggattgggaccccgg
cccccgcaagccggcaacgtgtacccgcttcggcaccccatgagaccacatgtgggtgag
gaggagggtggctttggagcgtggagaacggcgcccaactacagatgcaccggtcccgag
aaggaatatcgcaggtgcttctcgcaggtgtgcactggcatcccgctggactcgcgggct
gagcagtgcgccgcctttaatgccaaagagtttatggatcgtctctacgactgggagcct
ttcactgaggtcggccccgagaagcaatgcgagctgacgtgccgcccggtgggctaccgc
ttctacgtgcggcaggcggagcgggtgcgagacgggacaccttgcttcaacgtcacctct
aacgacgtgtgcgtccaagggcagtgccagacggagggctgcgacggtgtcctgggctcc
ggcctggcgctggacaagtgcggcgtctgcggggggcgggactcggcttgtcagaaggta
acgggcagcttccagaatgtcagcgttcccctcggctaccacaagatcttggacatcccg
gcgggggccaccttcattaacatcactgagagacgggccagtcccaactacttggccatg
aggagcgcaacgggggcttcggtggtaaacggccgctgggccgtggaccccccgggggaa
taccgggcgggcgggactaccttcacctacgcccgacctcgagcgcaggcggagggggaa
gacgagccaggggagtcactcagggccctcgggcccaccagcgcacagctgcagctctat
attatttaccaccagcagaacccgggaattgactatgagttctacatccccgtggagaag
accgaaagtgagacacccagtgagaggcaatcgcaggggagggcgccccttcgtgctgcc
cttggcgtgaccatcgacgaacctgcgcctgccgccatttctcctctttccgtcccttct
ttcccttccacctcctcctcctcttccctattcgttcccccgtcgtcacagcactgggcc
gcagggaggtcgccacctcgggcctcggcccccaatcgcaacgctcgcatcccacctcgc
accgacctgccgctggacacgcagttgcccttcgcgtggaggagggggtccctgacgccg
tgttctgcttcctgtggcaaaggttatcagtctcgagaaatcatctgcattgatcgccat
acggaggagcaagtgcctgagaggaaatgcgactccgccgctaaaccggcaccagaagag
gagccttgcaatacgcacggctgcccaccattctgggaggcgagcgcttggtccgagtgc
agcgtgtcgtgtgggcccggcgcgcagcaacggcaactgcagtgcaggcagactttcggc
aaccgctccaccatggtccacccacagcgctgcgccggacaggttccacccgagtccacc
caggcctgccagctgcagctctgctcgcactgggaggtgggctccgactggagcacgtgc
tcggtggactgcggcgtggggaagaggacgaggagcgtgcgctgcgtgagcgacgagggc
agtgtggtcaacgacatggagtgcagctcccgggctcggccgctgggcagtgaggagtgc
aacatgggaccctgcgtcaccaactggtactcgtccgcttggtctgccgcctgctcggcg
cgttgcggccccggcgtccagaagagggaggtggtgtgcctgacgcgcggaggcgtccga
gagggccaaggagcggcggactgtgtcgctgacaagccggccgagctgagagcttgcaac
ggtggtccttgtgtgcccgtcgccagttggtacagcggcccgtggacgcagtgcaacgtt
cggtgcgggaacggaacccagcgtcgggacgtcatctgcgtccagaagtcgggcgacgaa
ttcaccacactgccctcagcccaatgcacccacgaggacaaaccggccgccgtgcaggag
tgtgagatgggcgattgccagccgcagtggttcacgaccgagtggagcgcgtgttctcgc
tcttgcgggaaaggcctccagatgcgggaggtgcggtgtctgacttcggacaggagacac
agcccaaactgtgacgccggcgccaagcccgaccaggagcaaagctgcaacagtatcccc
tgcggccctcaagtcacagacgagaactgcagggaccgacgccacaactgcgtgatggtg
gtgcaggcccgcctctgcgtctactcctactacaagacggcctgctgtgcttcctgcacg
cacagcgccgcgcagcgcgccaagagacattga
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