Syngnathus scovelli (Gulf pipefish): 125975656
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Entry
125975656 CDS
T08785
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125975656 (clstn3)
Cell adhesion molecules [BR:
sscv04515
]
Cadherins
Cadherin related
125975656 (clstn3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
NICE-3
DUF5570
Motif
Other DBs
NCBI-GeneID:
125975656
NCBI-ProteinID:
XP_049587436
LinkDB
All DBs
Position
9:11830448..11852908
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AA seq
951 aa
AA seq
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MDTMKCLSFLFLCLTSVASGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGSDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
AVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPALHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTAALPTLPSSDSSLVFSFNGSNHVAV
VPDAVVSGLSGDHFTLQLWMRRWGSNVQPAAAQSKTARKEEETIVCSTVKNDDSFSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGALPNPAPRQRMSIGACWEPEDKQREVGNNSIPQVKYAGGYHGLLSGVTVRPGSVE
PHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSALVLEGDDIESFNRAVQQVTYRNS
LRFATPGVRPLKLTTSLRCFNEESCLSLKPLEGYLVVLQPDAPQISLSGVGPHLARPAPD
FEAPQGVHLFPELRIVCSLTHAINTAAQGMEGGALMSDAVAHTLDGCEVQPLGEELDLER
EELLVDMDVVRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLSRSSSRFERRFRLS
CSEMNGRYTSNELTLEVNFLHSLESMYHPSHLMASQQQFLHQHAGELSGHALPSLHRNSV
VPGAATIIIMVCVGFLVVMVILGIFRIRSIHRRSEEAREAAKEGGSQWDDSALTIIVNPM
ESYESRLGMSADTEGDGEEDEEEVAESPDNASDDQRIILKKEGRDSNARRY
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggacacaatgaaatgtctctccttcctcttcctttgcttgacttccgttgccagtggc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggcatcgtgatggag
aacgacaacacggtccttctcaacccgccactcttcgccttggacaaagacgcgccgctc
cactatgccggtgaaatttgtggtttccgggtacacaacggcccctcgggttccggctcg
gtccagttcgaagcggtggtcctggaccgctccaccggcgagggtctagtgcgctccaag
gagccgctagactgcgagagccagcgtgagcacagcttcaccatccaggcctacgactgc
ggcgaggggtccgacggcgtcaacagcaagaaatcccacaaggccaccgtacacgtgcgt
gtcaacgacgtcaatgagttctcccccgtgttcgtggagcgtcgctatgaggcgtccgtc
ccagaggggcgtctctttgaccgcatcgtgcgtgtggaggctctggatgccgactgctcc
ccgcagtacagccagatttgcttctacgacatcatcactcccaacgtgccctttgctatt
gacaacgatggcaacatcaagaacacagagccgctggattccaagcgtcagcgcgttcac
actttctgggtgaccgccttcgactgcggcaagaatcgcgctcaggccgacgctcaggtg
gcggtcacggtcaagccctcctgcaagcccggctggatcggttggaccaagcgggtggag
tacacacccggctcgggaagcatcccgctcttccccgccttgcacttggagacttgcgag
gagaccgtgtggaacatccaggccaccgtagagcttcagaccggccacatcggaaagggc
tgcgaccgagacagttactccgaccgttccgtgcgacgcctttgcggcgccgttcggggt
gaagtcgacctccttccgcctccatcacccgcagccaactggacggcggccctccccacc
ctcccttcctcggattcctcacttgtgttctccttcaacgggtccaaccatgtggcggtg
gtgccggacgcggtggtctcggggctgtccggcgaccatttcaccttgcagctatggatg
cgtaggtggggctccaacgtccagccagctgctgctcagtccaaaactgctcgcaaggaa
gaggagaccatcgtgtgcagcactgtcaagaatgacgactcgttctcccactactcgctc
tccgtgcatggctgccgcctctctctcttctactggcctgacgtctcggctgcacggccc
gtcaagttcctgtggaaactggagcaggtgtgcgacagcgagtggcaccacctgtcactc
agcgtccagttcccctcggtgaccctgtacgtggacggcgtaaccttcgaccctgctctc
atccacgacaatggcgccctgcccaacccggccccccgccagaggatgtccatcggcgcc
tgctgggagccggaggacaagcagagggaggtcgggaacaacagcatcccacaagtgaaa
tacgccggaggttaccacggcttgttgtcgggggtaacggtgcgtccgggcagcgtggag
cctcacagcgtggtggagtgtctgtatgcctgcagggagggcctggactttggagacctg
gagacgttggggtccgggatgaaggtgcacgtgaaccccagtcagtcggcgttagtgctg
gagggggacgacattgagagtttcaaccgcgccgtgcagcaggtgacctacaggaactcc
ctccgcttcgccacgcccggagtgcgacccctcaaactcaccacctcgctcagatgtttc
aacgaggagagctgtctgtccctgaagccgttggaaggttacctggtggtcctccagcct
gatgctcctcagatctctctgtctggggtcggtccccatctggctcgccccgctcccgac
ttcgaagccccacagggcgtccacctcttccccgagctacggatcgtctgctcgctcact
cacgccatcaacacggctgcgcaggggatggaaggcggtgcgctgatgtccgatgccgtg
gcccacactttggacggctgcgaggttcaacctcttggcgaggaactggacctggagcgg
gaggagctcctggttgatatggatgtcgtgcgagagcggggcttggagatcatcaacacg
accgcctacatcgccatcacaggcgctgaatccatctctgtatacgaagacgtccttcgc
tcagtccgctaccgcctgtccaggagctcctcccgcttcgagagacgcttccgtctgtcc
tgctctgagatgaacggcagatacaccagcaatgagttgactctggaggtgaacttcctc
cactccttggagagtatgtaccacccatcccacttgatggcttcccagcaacagtttctc
catcaacacgcaggcgagctcagcggacatgccttgcccagtctacatcgcaactcagtg
gtccccggagccgccaccatcatcatcatggtgtgcgtgggattcttggtcgtcatggtg
atcctgggcattttccgcattcgctccatccaccgccgcagcgaggaggcccgcgaggcc
gccaaggagggtggcagccagtgggacgactccgcgctcaccatcatcgtcaaccccatg
gagtcctacgagtctcgcctgggcatgtccgccgacacggagggagacggcgaggaagac
gaagaggaagtggccgagtcgcccgacaacgccagcgatgaccagcggatcatcttaaag
aaggagggcagggacagcaacgcccgtcgctactga
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