Syngnathus scovelli (Gulf pipefish): 125975659
Help
Entry
125975659 CDS
T08785
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
sscv04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125975659 (ntrk1)
04020 Calcium signaling pathway
125975659 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125975659 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125975659 (ntrk1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125975659 (ntrk1)
Protein kinases [BR:
sscv01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
125975659 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
LRR_8
Ig_2
C2-set_2
ig
TrkA_TMD
LRR_5
C2-set_3
Haspin_kinase
CFC
Motif
Other DBs
NCBI-GeneID:
125975659
NCBI-ProteinID:
XP_049587443
LinkDB
All DBs
Position
9:complement(11937014..11949508)
Genome browser
AA seq
825 aa
AA seq
DB search
MAMAKGAAFLALALPLLLSLAPAPSLQGCPSACRCSFAVLQCLEPDGIAGVPALGPQESE
NVTEIYIENQAGLENITQVELMNYKELKNLTVTSCKLRHIAADAFRHNLKLQYVNLASNS
LEHISWRVFHFLPLLNLVLQDNPLACSCELHWLQRWQRGERGDTDDQPLTCWAAGRQVPL
ASLVLVNCSLPEVTILPSNNKVQEGGNLTFECHVTGSPTPQVKWRTHALRSHFVPQERIW
GSTLEVVLYLTNISSSDNLHNLTCEAENQAGPGEDVVQLDIEFPAKILNLSDAVQLHHWC
FSFVVDGNPEANISWLYEGAELKETAFTYTQFIPDSGDGSKKHGCLSLDKPTHINNGRYT
LLVENKLGRDQATAIGKFMDNPFGLFDPEGIIPGRFQNVDILLSTFVLSFVFLSHMQVNN
LDPVPTNKSVMDVTENLESRVFVVSVAVGLAAFACVFLLVTALVINKCGHNSKFGIHRSS
VLGAEDELAVSLRFMNLGSSPPSSDEDSGLSSFVENPQYFCGIVKDKDMCVQHIKRADIV
LKWELGEGAFGKVYLAECANLSPDSDRMLVAIKTLKDANESTRQDFQREAELLTVLQHQH
IVRFYGVCTDGEPLAMVFEYMRHGDLNRFLRAHGPDARILEESKTVAQGELTVPQMLHIA
AQIASGMLYLASLHFVHRDLATRNCLVGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI
RWMPPESIMYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRT
CPKQVYLLMRGCWQREPQQRTLIKDIHAQLLALVKNPPVYLHILA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcaaagggtgcagcgtttctggcgctggcgttgcccctgctcttgagcctg
gcgccggcgccgagcctgcaaggatgcccgtcagcttgccgttgctctttcgccgtgctg
cagtgcctggagcctgacgggatcgcaggtgtccccgctctggggccacaagagagcgag
aacgtgacggagatctacatcgagaaccaggcaggcctggaaaacatcacgcaagtcgag
ctgatgaactacaaagagctgaaaaacctcacggtgacgtcgtgcaagctgagacacatc
gccgccgacgccttccgccacaatctgaagctgcagtatgtgaacctggcgtccaattct
ctggagcacatttcctggcgggtctttcatttccttcccttgctcaacctggttctgcag
gacaaccctctggcctgctcgtgcgagctccactggttgcagcgctggcagcgtggtgag
cgcggtgacacggatgaccagccgctgacgtgttgggccgccggacgccaagtgccgctc
gcctcgcttgtcttggtcaactgcagtctgccggaggtcaccattctgccctccaacaac
aaggtgcaggaggggggcaacctcacctttgagtgtcacgtgacaggaagtcccaccccg
caagtcaagtggcgcacgcacgctctccgctcgcactttgttccccaggagagaatttgg
ggctctacgctggaggtggtcctgtacctgaccaacatttcttccagcgacaacctgcac
aacctgacctgcgaggcggagaaccaggccgggcccggcgaggatgtggtgcagctggac
attgagttcccggccaagatcctgaacctgagcgacgcggtccaattgcaccactggtgc
ttctcgtttgtggtggacggcaacccggaggccaacatcagctggctgtacgaaggcgcc
gagctcaaggagacggccttcacctacacgcagttcatcccggactcgggcgacgggtcc
aagaagcacggctgcctgtcgcttgacaagcccacgcacatcaacaacggccgctacacg
ctgctggtggagaacaagctgggccgggaccaggccaccgccatcggcaagttcatggac
aacccttttggactctttgaccccgagggcatcattcccggtaggttccaaaacgttgac
attttgctgtccacttttgtcctctcatttgtgtttctttcccacatgcaagtcaacaac
ttggatccagttcccaccaacaaatctgtcatggacgtcacagagaacctggagagtcga
gtctttgtggtatcggtggcggtgggcctggccgcgtttgcatgcgtcttcctgctggta
actgccttggtcatcaacaaatgcggccacaactccaaatttggtattcaccgctcgtcc
gtgctgggggccgaagatgagctggccgtgtcgctgcgcttcatgaacttgggaagcagc
cctccttcctcggacgaagactcaggcctctccagcttcgtggagaacccgcagtacttc
tgcggcatcgtcaaagacaaagacatgtgcgtccagcacatcaagcgtgccgacatcgtg
ttgaagtgggagctgggcgaaggcgctttcggcaaagtctacctggccgagtgcgccaac
ctgagccccgacagcgacaggatgttggtggccatcaagaccctgaaggacgccaacgag
tcgacgcggcaggacttccagagggaggcggagctcctgacggtgctgcagcatcagcac
attgtacgcttctacggcgtgtgcaccgacggcgagccgctcgccatggtcttcgagtac
atgcggcacggcgaccttaaccgcttcctccgagctcacggccccgacgctcggatcctg
gaggagtccaagacggtggcgcagggcgagctgaccgtgccccagatgctgcatatcgca
gcccagatcgcctcagggatgctctacttggcctcgctgcactttgtccaccgagacctg
gccacgcgcaactgcctggtgggagaaggcctggtggtcaagatcggagacttcggcatg
tcgcgggacatctacagcaccgattactatcgggtggggggccgcaccatgctgccaatc
cgatggatgccacctgagagcatcatgtacaggaagttcaccacagagagcgacatctgg
agcttcggcgtggtcctctgggagatcttcacctacggcaaacagccctggtaccagctg
tccaacagtgaggccattgagtgcatcacgcagggccgcgagctggagcgtccccgtacc
tgccccaaacaagtttacctgctgatgcgcggctgctggcagcgagaacctcagcagagg
acgctcatcaaggacatccacgcacaactcctcgccctggtcaagaacccgcccgtctac
ctgcacatcctcgcttag
DBGET
integrated database retrieval system
