Syngnathus scovelli (Gulf pipefish): 125975666
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Entry
125975666 CDS
T08785
Symbol
nop2
Name
(RefSeq) 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125975666 (nop2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
125975666 (nop2)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125975666 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
PCMT
Motif
Other DBs
NCBI-GeneID:
125975666
NCBI-ProteinID:
XP_049587460
LinkDB
All DBs
Position
9:11663455..11668041
Genome browser
AA seq
756 aa
AA seq
DB search
MGRRLDPANKVKRGPGRKSRKQQGAETELTKFVKDEESEKKRQSRRARIRNAKKIANTLT
KAKAAAEEQAKKGFTDENSKWLKPTKRKPKLEQSDSEDDSDEHWEEEDDFDEEEEAEVGA
PPSKKNEGKNQAKMNTQLGMKELEEDDEDDDEEMVDDYGALDEEESDGEELLPIERAAKK
QKKLNQTMGLDDEEDDDDSDEVDDDKYADKKSDDEEEETLQTNVDDLDQFRLPRPEEGEN
EGVLPVDLKTIHQRIKDNIDVLCNFSSKREPGKARVDYVALLKNDLCTYYSYNEFLVEKF
IELFPPSELVEFLEANEVHRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVI
YDSSVPIGATPEYLSGQYMLQGASSFLPVMALAPQEGETVLDMSAAPGGKTTYIAQLMKN
TGVVIANDANADRLKSVVGNIHRLGVTNTLVCNYDGRRFPKVLGGFDRVLLDAPCSGTGI
IAKDPAVKTNKDEADILRAAHLQKELLMSAIDSVNAQSTSGGYLVYCTCSVMVEENEWVV
DYALKKRNVKLVPTGLDFGKEGFTRFRAHRFHPTLQLTRRFYPHTHNMDGFFVAKFKKFS
NVIPTAPTAKEEATADAPDEKVAKADKIKKVIPGEAGELKQEAKINGTAAKKRPHFQAKG
KNNSPAGPKKAKLARMDRDTVTGQGTKTPAMAGTKAGKKAESRFKKKQANQKENPMKAKN
KTGNNFNKNRKKKQQAKNTMGKNTFNKKWKKKQARS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaggttggatcccgccaacaaggtgaaacgaggtcccgggcggaaatccaga
aagcagcaaggggcggaaacagagttaaccaaattcgtaaaagatgaggaatcggagaaa
aaacgtcagtcaagaagagccaggataaggaacgcaaaaaaaatagccaacactttgaca
aaggctaaagcagctgctgaggagcaggctaagaaaggcttcacagacgagaacagcaaa
tggctgaagccgacaaagaggaagcccaagctggagcaatccgacagcgaggatgacagc
gacgagcactgggaggaagaagacgattttgatgaggaggaggaggcagaagtcggagcg
ccgccatcgaagaagaacgaaggaaagaaccaagcaaagatgaacacacaactgggaatg
aaagaattggaggaggatgatgaggatgatgatgaagaaatggtagatgactacggtgct
cttgatgaagaggaaagtgacggagaggagcttctccctattgagcgtgcagccaaaaaa
caaaagaagctgaatcaaactatggggcttgatgatgaggaggatgatgatgatagtgat
gaggtggatgatgacaaatatgccgataaaaaatctgatgatgaagaggaagaaacattg
cagaccaacgtagacgacttggatcagttcaggcttcctagaccggaggagggtgagaat
gaaggagtcctgcctgtggacctgaagacgatacaccaaagaatcaaggacaatattgac
gtcctttgcaatttttcatcgaaaagagagccagggaaagcgagggtagactacgtcgct
ttgctgaaaaatgatctttgcacctactacagctacaacgagttcctcgtcgagaagttc
atcgagctcttcccgccctcggagttggtggagttccttgaggcgaatgaagttcacagg
ccggtcaccattcggaccaacacattgaaaaccaggaggagggacctcgctcaggcccta
atcaacagaggtgtgaacttggatccactaggaaaatggtccaaagtgggtttagtcatt
tatgattcctctgtccccattggcgccactccggagtacctgtctggtcagtatatgctg
caaggcgcttccagctttcttccagtaatggcgctcgcgccccaggagggcgagaccgtg
ttggacatgagcgccgccccgggaggaaaaaccacttatatcgctcagctgatgaaaaac
acgggggtggtcatcgctaacgatgccaacgctgacagactgaagagcgtggtgggcaac
atccaccgtctgggcgtcaccaacacgctagtgtgcaactacgacggcaggcggttccct
aaggtcctgggcggcttcgacagagtgctcctcgatgctccgtgctccggtacaggcatc
atcgctaaagaccctgctgtgaagaccaacaaggatgaagctgacatcctgcgcgccgcc
cacttgcagaaagagttgctcatgtccgccatcgactctgtcaacgcccagtccacctcg
ggaggctatctggtctactgcacgtgttccgtgatggtggaggaaaatgaatgggtggtg
gactacgcgttgaagaagaggaatgtcaaattggtgcccaccggactggattttggcaag
gagggcttcaccaggttcagagctcaccggttccatccgactctgcagctcaccaggcgg
ttttacccccacactcacaacatggacggcttttttgtggccaagtttaaaaaattctcc
aacgtgattccaactgcacccacagcgaaagaagaagctacggcagatgctccggacgaa
aaagtggccaaagcggacaagatcaagaaggtcatccccggcgaggcgggcgagttaaag
caggaggctaaaattaatggaacagcagcaaaaaaaaggcctcacttccaggctaaaggg
aaaaacaactctcctgctggaccgaaaaaagctaagctagccaggatggacagagatact
gtgacgggacaagggaccaagacgcccgccatggctgggacgaaagcggggaagaaggct
gagagcagatttaagaagaagcaggccaaccagaaggagaaccccatgaaagctaagaat
aaaacggggaataatttcaacaaaaataggaaaaagaaacaacaagctaagaatacaatg
gggaagaatacattcaacaaaaagtggaaaaagaaacaagcgagatcataa
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