Syngnathus scovelli (Gulf pipefish): 125975671
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Entry
125975671 CDS
T08785
Symbol
pou2f2b
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125975671 (pou2f2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125975671 (pou2f2b)
03021 Transcription machinery [BR:
sscv03021
]
125975671 (pou2f2b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125975671 (pou2f2b)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
125975671 (pou2f2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
125975671
NCBI-ProteinID:
XP_049587470
LinkDB
All DBs
Position
9:complement(13477028..13532931)
Genome browser
AA seq
727 aa
AA seq
DB search
MFVPLPVPFVFQRAAPDLSAWRLKSSLALRSNSDSRMPRPAEPDKLGVDSPLDSTDSERN
VSDSNHQAQSIKVNPFSLSPSLSSSKNKMEECGQMSPALPPPHGPTPSPSQTTLQHTQLM
LTGSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAHAAAQATQQAQA
AAANQQAHKHQQQQHLQHETGQTGQQALGQSTQEHTTQNVPAPPPPPQLALSQPIQLTAQ
DIQQLLQLQQLVLVPGHSLPSPGSFLLPQAQQSQQGLLSTPNLIPLPQANHGSLLSAQSR
IGLQAQRDKSLEASGSLSSAAAVPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLA
MGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSIDSTLPSPSSLSSPS
LGFDGMPGRRRKKRTSIETNVRVALERAFLTNQKPTSEEILLIAEQLNMEKEVIRVWFCN
RRQKEKRINPSSSTPPLPSHPASAPSAHKPACYSPHMMSNQLSQAASGLGSATATAVSPV
CPLTSSLTSSSTPSPVTPPPAPPRSTASPATPSHSAINLNASLWRVGKKNGEVSSYISDF
ATNLRNTVMGVNTGMNQALLANNPLATIQALAASGCQLPLSSLEGGGKMMLGASGGQGSG
LAASLFLNHPALLHMGQSLGAGLLNAASRPSPFAPSASSISPTLCSPCSSPASSCSSSEM
AHSPKME
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtctttcagagagctgctcctgacctcagcgcc
tggcgtctcaagtcctccctggctctccgctccaactccgatagcaggatgccaaggccg
gctgagcctgacaaacttggagttgactcaccgctggacagcacagattccgagcgcaac
gtctccgactccaatcaccaggctcagtcaataaaggtcaatcccttttccctttcaccc
agcctgagtagcagcaagaataagatggaagagtgtggtcagatgtctcctgcactgcct
ccccctcacgggcccaccccctccccctcccagacaacactgcaacatacacaactcatg
cttactggctcccagctggcagggctcacagctctgttgccggcgcagcagcagctcctg
ttgcagcaggcccaggctcagctgctggccgccgccgtgcagcagtccaatgctgctcac
gctgcccacgctgcccacgctgctcacgctgccgctcaggccacacagcaagctcaggcc
gctgcagccaatcagcaggcccacaagcatcagcagcagcagcacctgcagcatgagacg
ggacaaacaggccagcaggcgctgggacagagcacacaggaacacactacccaaaacgtc
cctgccccacctcctccgccccagcttgccctctctcagccaatccagctcaccgcccag
gacatccagcagttgctgcagctccagcagctggtgttggtgccgggccactcgctaccg
tcgcctggctcgtttctcctcccgcaagcgcagcagagccagcaaggactcctgtcgaca
ccaaatcttattccgctacctcaagccaaccatgggagcctgctgtctgctcagagtcga
ataggactgcaagcacagcgagacaagagcctggaggcgagtggcagcttgagctcggca
gccgccgtgccctctcaccccgaggagcccagtgacctggaggagctggagcagtttgct
cgcaccttcaaacagaggcgcatcaagctgggcttcacgcagggcgatgtgggcctggcc
atggggaagttgtatggcaatgatttcagccagaccaccatctcccgcttcgaggccctc
aacctgagcttcaagaacatgtgcaagctgaagccgctgctggagaagtggctcaacgac
gcagagaccatgtccattgacagcacccttcccagccccagctcgctgtcatcgccctcg
ctgggcttcgatggcatgcccggccgccgcaggaagaagagaaccagcattgagaccaac
gtacgcgttgccctggagcgcgccttcttgacgaaccagaagcctacctcagaggagatc
ctgctgatcgccgagcagctcaacatggagaaggaggtgatccgtgtgtggttctgcaac
cgccggcagaaagagaagcgcatcaaccccagcagctccaccccacccctgcccagccac
cctgccagcgccccgtccgcccacaagcctgcctgctacagcccccacatgatgagcaac
cagctttcccaagccgcgagcggtcttggaagtgcgacggccaccgccgtgtcccctgtc
tgccccctgacctccagcctcacctctagctccaccccctccccggtcacgcctcctccg
gctcctccgcgcagcacggccagcccagccacccccagccacagcgccatcaatctcaat
gccagcttgtggcgtgtgggcaagaagaacggcgaggtgtcaagctacatcagcgacttt
gccaccaacttgaggaacactgtgatgggtgttaacactgggatgaaccaagccctcctc
gctaacaatcccctggccactattcaagccctggcagccagtggttgccagctgcccctt
tccagtcttgagggcggtggcaagatgatgctgggggcgtcgggcggccagggcagcggg
ctggctgcctcgctcttcctcaaccacccggcgctcctccacatgggccagagcttgggt
gccggcctgctgaacgcggcctcgcgcccttctcccttcgccccctcggccagcagcatc
agcccgaccctctgctcgccctgctccagccccgcctcctcctgctcatccagcgaaatg
gcacacagccccaagatggagtga
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