Syngnathus scovelli (Gulf pipefish): 125975673
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Entry
125975673 CDS
T08785
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125975673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125975673
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
125975673
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Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
RRP12_HEAT
SAM_PNT
FliG_M
Motif
Other DBs
NCBI-GeneID:
125975673
NCBI-ProteinID:
XP_049587483
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All DBs
Position
9:12451339..12459159
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AA seq
705 aa
AA seq
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MRKPLPQKAIEWKDARRIKHARSGRPSRLPALFQGHFSWDKYLKDTGASAAPASCFRQSL
TPPINEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEIQ
PIGNCEKSGGMLQPPLGFRLNASSWPLFLLKTLNGAEMAPPRIFHKQEPPAPEKNAFQVG
MKLEAVDRKNPHFICPATVGALRGVEVQVTFDGWRGAFDYYCRYDSRDIFPVGWCARTGD
NLQPPGTKAVMPKTVGPLTDGTVDSSAADAPPAVSKAAGQRGRKPGRRKAKGSWSQKASA
LPSIQTDKGLEPVKVPKKRGPKPGRKLSWVKKASFSPDATAGPGRPTTGPGRPRGRLSVN
WAQRLALPQAQDVPVKIPKKRGPKPGSKRKPRLVANPVPTSPTSSTPEPDTSTVPLDNAT
IPKFALQAPTVCVYLNKYSKVGPHLDQRRIRQLPDHFGPGQASSVLQQCVQACVDSAHNQ
ATVFSCLKPGQGGKVISAFFEKQQHTLTLPIASSVTYVLRFLEKLCHNLHCDPLFGSQPV
AGESPLFTTDRKGLAELTTNPSRGTKRHLQNSHKKTLAKISRAAANWQSMESSVGAARLE
HFKTRPLSPSSQKSGSRVQSSGSSCFGESPKAGGQDPNVWSVDDVMHYIRDIDPVLAPHA
DLFRKHEIDGKALLLLRSDTMMKYMGLKLGPALKLTFHIDKLKRA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcctctgccgcagaaagctatagagtggaaagatgcaagaaggatcaagcac
gctcggagtggacggccatcccggttgcccgccctcttccaaggccatttcagttgggac
aagtacctcaaagatacaggcgccagtgcggcaccagcttcatgcttccgtcagagcctg
acaccgccaatcaatgagttcaaagcgggtatgaagctagaggctcaggacccgcgcaac
accacctccacctgcatcgccactgtggtgggcctgacgggctcgcggctccgcctacgc
ctggatggctccgacaacaagaatgacttctggcgcctggtggactcgtccgagatccag
cccattggcaactgcgagaagagcggcgggatgctgcagccaccgcttggtttccgcctc
aacgcatcctcctggcccttgtttcttctgaagacactcaatggtgctgagatggcccct
ccacgcatctttcacaagcaggagccccccgctccggagaagaacgccttccaagtgggc
atgaagctggaggcggtagaccgcaagaaccctcacttcatctgcccagccacggtgggc
gcgctgcgcggagtggaggtgcaggtcacctttgacggctggcgcggtgccttcgactac
tactgccgctacgactcgcgcgacatctttccggtgggctggtgcgcccgaaccggggac
aacctgcagccgcccggaacaaaagcggtgatgccaaagacagtagggccgttaacggac
ggcaccgtggacagctcggccgcggacgcgccccccgcagtaagcaaagctgctggtcaa
aggggccgcaaacccggccgcaggaaagccaagggctcctggagtcaaaaagcctcggca
ctgccaagcatccagacagacaaaggcctggagcctgttaaggtgcccaagaaacgcgga
cccaaaccagggcggaagttgagctgggtgaaaaaagccagcttctcgccggacgccacg
gccgggcccgggcggcctacaacgggcccgggacgaccccgtgggaggctctcagtcaac
tgggcgcagaggttagccctgccccaggcgcaggacgtgcccgtcaagattccaaagaaa
agaggcccaaagcctggcagcaagagaaaacctcgcctggtagctaatccggtccccacg
tctcccaccagcagcaccccggagcccgacaccagcaccgtgcccctcgacaacgccacc
atccccaaatttgcactacaggcccctacagtatgcgtctacctaaacaagtacagcaag
gttggtccccatttggaccagcgacgcatccgccagctgcccgaccacttcggtcccggt
caggcgtcatcggtgcttcagcagtgtgtccaagcctgcgtcgactccgcccacaaccag
gccaccgtcttctcctgccttaagcccggccagggcggcaaggtcatttcagccttcttt
gagaagcagcagcacacactgacgctgcccatcgccagcagcgtcacctacgtcctccgc
ttcctggagaagctctgccacaacctacactgtgacccacttttcggcagtcagcctgtg
gccggagaaagtccactcttcactacagacaggaaaggtttggcagagttgaccacgaat
cccagtcgaggcaccaagaggcacctgcagaactcgcacaaaaaaaccctggccaagatc
tcccgggccgctgccaattggcagtccatggagagcagcgtcggggcggcaagattggag
cacttcaagacgaggcccctctcccccagctcgcaaaagtcggggagccgtgtacagtcg
tcaggatcgagttgttttggagaaagccccaaggccggcggtcaggaccccaacgtgtgg
agcgttgacgacgtcatgcactacatccgagacattgaccccgtgctggcgccgcacgct
gacctgttcaggaaacatgaaatcgatggcaaggcgctgctgctgctgcgtagcgacacc
atgatgaagtacatgggcctgaagctgggccccgccctcaaactcacctttcacattgac
aagctaaaacgagcctga
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