Syngnathus scovelli (Gulf pipefish): 125975687
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Entry
125975687 CDS
T08785
Symbol
bcam
Name
(RefSeq) basal cell adhesion molecule isoform X1
KO
K06578
Lutheran blood group glycoprotein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sscv04090
]
125975687 (bcam)
CD molecules [BR:
sscv04090
]
Proteins
125975687 (bcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
V-set
C2-set_2
ig
Ig_4
Ig_5
C2-set_3
C1-set
CD34_antigen
Insulin_TMD
Orf78
S1FA
Amnionless
ERGIC_N
Protocadherin
DUF6377
Motif
Other DBs
NCBI-GeneID:
125975687
NCBI-ProteinID:
XP_049587520
LinkDB
All DBs
Position
9:12672476..12719381
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AA seq
616 aa
AA seq
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MDGINFGHAWLVCTLLLCPLHLCRALVTVNVAREVEVLKDETARLHCSYTISPPSGNSLV
EWHIEVQGNRKRVAYRKQGGEAKSDNDTPLSGRVSISEDFTLTITSVQPSDGLAYFCSVT
AGPAGNGEGATELKVFFAPENPIITKASTQAISVGQPGSSEIGNCVTMNGHPQPRIIWFK
DGQPLAEVKDRKEKTYMIPSLVKEASGLYTIKSTLYMQPTKADKDSVFQCTVEYRMPGDQ
IKQKTSDTIDLNLYYPSETATFTLLNTGPVKEGDNVTMKCETDGNPQPEFDFTKDDKFIA
AQGGLLALQSAKRTDSGVYTCKAIDFDNLDAELTGQITLNVHYMDLMNVTPAKPQVVMLG
DTVGWQCKTKASAPHTVQWKKGSEVLSQDGTLSITADSYEKDGEYECVGAVPSVPGLTAR
ASAALTIRGQPVIETPIVGEVANVGDMVSLRCSSYGFPVPQFIWKPSGKESVMVEGNKAV
STVVLPASAVVMKDGVTCEVANEYGTDSKTFSVSLKRVHNSADRVLLSGNPVLKSANQQQ
GGSSGVVIAVVVCVLLLLLLVALIYFLNKKSKLPCSKKDTKQVADTEVNNDIVVEMKTDK
ANEEAGLLNKRPPAEQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggacgggataaacttcggacacgcgtggcttgtgtgcaccttgctgctgtgcccattg
cacctgtgccgagcgttggtgacggtcaacgtggctcgggaagtggaggtgctgaaggat
gagacggctaggctgcactgctcatacaccatttcgccgccgtccggaaacagcctcgtg
gagtggcacatcgaggtgcagggcaacaggaagcgcgtggcctaccgcaagcagggcggc
gaggccaagagcgacaatgacacgccgcttagcggccgcgtcagcattagcgaggacttc
accttgaccatcacttcggtccaaccctccgacggcctcgcctacttctgctcggtcact
gccggacccgccggcaatggagaaggcgccaccgagctcaaagtcttctttgctccagag
aaccccatcatcacaaaggcgtcaacgcaagccatttctgtggggcagcctggcagctcc
gagatcggtaactgcgtcacgatgaatggacacccacagccaagaatcatctggtttaag
gatggccagccccttgccgaggtcaaggaccggaaagaaaagacctacatgattccgtct
ctggtgaaggaggcgtcgggcctgtacaccatcaagagcacgctctacatgcagcccacc
aaggctgacaaggactcggtgttccagtgcacagtggagtatcgcatgccgggagaccaa
atcaagcagaagacgtccgacaccatcgacctcaacctctactacccctcggagacagcg
acctttaccctgctcaacaccggccccgtcaaagagggcgataacgtcaccatgaagtgt
gagactgacggaaaccctcagcctgagttcgacttcaccaaagacgacaaattcatagca
gcccagggcggccttctagcgttgcaatcggccaagcgcaccgactctggcgtgtacacg
tgcaaggccatcgactttgacaatctggacgctgaactgacgggccaaatcaccctcaac
gtgcactacatggatctgatgaatgtgaccccagccaagcctcaggttgtcatgctcgga
gacaccgtgggatggcagtgcaagaccaaagcctcggcccctcatacagtgcaatggaaa
aagggctctgaggttctctcccaggacgggaccctctccataacagccgactcctacgag
aaagacggagagtacgagtgcgtcggggccgtgccgtccgtgccgggactgacggcccgg
gctagcgctgccctcaccatcagaggacagcccgtgatcgagacgccgattgtcggggag
gtggccaacgtaggagatatggtgtccctcaggtgctcctcctacggcttccccgttcca
cagttcatctggaagccatcggggaaagagtctgtgatggtggagggtaacaaggcggtg
agcaccgtcgtcctgccggccagtgccgtcgtcatgaaggacggcgtgacctgcgaggtg
gctaatgagtacggcaccgatagcaaaaccttcagtgtatctctcaaaagagttcacaac
tccgccgacagagtgctgctctctggaaaccctgtgcttaagtcagctaaccagcagcag
ggcggttccagcggggtggttatcgccgtggtggtgtgcgtgctgctgctcctgctgctg
gtggccctcatctacttcctcaacaagaagagcaagctgccctgctccaagaaggacaca
aagcaagtggcggacactgaagtgaacaatgacatcgtcgttgagatgaagactgacaag
gccaacgaagaggccggcctcctcaacaagagaccgcccgcagaacagtga
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