Syngnathus scovelli (Gulf pipefish): 125975718
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Entry
125975718 CDS
T08785
Symbol
phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125975718 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125975718 (phf1)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125975718 (phf1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125975718 (phf1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125975718 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
zf-RING_Vps41
Chromo
ASH2L-like_WH
DUF4537
Motif
Other DBs
NCBI-GeneID:
125975718
NCBI-ProteinID:
XP_049587603
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All DBs
Position
9:11879057..11889446
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AA seq
508 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDTVKQCCLVRFEDNSEFWVLRKDIHSFAAGEED
VCCICEAPPLKEPLVNCLKCRHGYHAECHTPSIEPEADDESWICRQCVFAVATKRGGAIK
RGRFARLMHSMKLRLPYQLTSLDWDAQHLSNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLSKPILYGDRFYQFQCSVCNKGPETVKRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGELSDTPRQERCHNLLNALNSQKDRFVSGKEIKKKKCLFGLQ
VRAPPPLLSDSSPLITEPPINISHRRSPPSLPCQRRPPAPESRKSKRRITETQASPPPVP
SNAVEPLPFCHGYAGGDGLYAPAKSQEELHLSSPPKRMYALYHTALARGLHHSNSTEDCR
RVAPPCFPYPLNSSERLHQSGHKQAEDLLLCDSPPCPLPGGAGSPDGAHDGRLPRSWGGG
EAVRILARRVTPDGKVQYLVEWDNVGLY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtgagcgagggcgacgacgtgctggccagatggagcgacgggctcctctac
ctgggcaacgtcaagcgggtagacaccgtcaagcaatgctgcctggtcaggtttgaggac
aactccgagttctgggtcctgagaaaagacatccactccttcgcagccggcgaggaagac
gtttgctgtatctgcgaggcgccgcctcttaaagaacccctcgtaaattgtctgaaatgt
cgccacggttatcacgccgagtgccacacgcccagcatcgagcccgaagccgacgacgaa
tcctggatctgtcgccagtgcgtctttgccgtggcaaccaagagagggggtgccattaaa
cgtggccgcttcgctcgcctgatgcactccatgaagctgcggctgccgtatcagctgaca
tctttggactgggacgcgcagcacctgtccaatcagcagcagtgttactgctactgcgcc
ggacccggagagtggaacctgaagatgcttcagtgcggaagctgcggccagtggttccac
gaggcctgcacgcagtgtctaagcaagcctatcctctacggcgacaggttttatcagttc
cagtgctcagtgtgtaataaaggacccgaaacagtcaaaagactccccatgacctgggtg
gacttggcccacttggtgctctaccacctgtccctgtgctgcaagaggaagtactttgat
tttgaccatgaaatcttgtccttcaccaacgagaactgggactcgttgctcctgggcgag
ctctctgacacgccaaggcaagagcgatgtcacaatctcctcaacgcactcaactcccaa
aaggacaggtttgtctctggaaaagaaatcaagaagaagaagtgtctttttgggcttcag
gttcgagcgccgccgccgctgttgtccgattcgtcgcccctcatcactgagccgcccatc
aacatttcccatcgcagaagcccgccgtcgctgccgtgtcagaggaggccgcctgcaccc
gaatcacgtaaatcaaagcggcgcatcaccgagacgcaggctagtccgccgcccgttccg
tccaacgcagtggagccgctaccattttgccacggctacgcgggaggagacggcctgtat
gcgcccgcaaagtcccaggaggaactccatctgagttctccccccaagcggatgtacgcc
ctctaccacacggcgctcgccagaggtctgcatcactccaacagcacggaggactgccgc
cgagtagccccgccctgctttccatacccgctcaactccagcgagcgcctgcaccagtcg
ggacacaagcaagcggaagacctcctgctgtgcgactctccgccttgtcccctgccgggt
ggggccggaagcccggacggggcgcacgacgggcggctccccaggagctggggcggaggc
gaggcagtcagaatcctggccagacgcgtcacgcccgatgggaaggtgcagtacctggtg
gagtgggacaacgtgggcttgtactga
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