Syngnathus scovelli (Gulf pipefish): 125975827
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Entry
125975827 CDS
T08785
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
KO
K08336
ubiquitin-like protein ATG12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04068
FoxO signaling pathway
sscv04136
Autophagy - other
sscv04140
Autophagy - animal
sscv04621
NOD-like receptor signaling pathway
sscv04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
125975827 (atg12)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125975827 (atg12)
04136 Autophagy - other
125975827 (atg12)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125975827 (atg12)
04622 RIG-I-like receptor signaling pathway
125975827 (atg12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125975827 (atg12)
04121 Ubiquitin system [BR:
sscv04121
]
125975827 (atg12)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125975827 (atg12)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
125975827 (atg12)
Ubiquitin system [BR:
sscv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
125975827 (atg12)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125975827 (atg12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
XendoU
Motif
Other DBs
NCBI-GeneID:
125975827
NCBI-ProteinID:
XP_049587805
LinkDB
All DBs
Position
9:complement(11425881..11427418)
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AA seq
117 aa
AA seq
DB search
MSDNADSPTETPKEELHSPPEDSTTNEEKKKIDVLLKAVGDTPIMKTKKWAVDRSRTVQS
LSQFIARFLKMDANEQLFIYVNQSFAPSPDQEVGILFDCFGSDSKLVLHYCKSQAWG
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaatgcggactcaccaacagagaccccgaaagaggagctacactcacctccc
gaagattcgacgactaacgaagagaaaaaaaagattgatgtcctgctgaaggcagttggg
gacacccccattatgaaaaccaagaaatgggccgtggacaggagcaggacggtgcagtca
ctttctcagtttatcgctcgcttcctcaagatggatgccaacgaacaactgttcatctac
gttaaccagtcgtttgcgccctcaccggaccaagaagtggggatcctctttgactgtttt
ggaagtgacagcaaactggttctgcattattgtaaatctcaagcttggggttga
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