KEGG   Syngnathus scovelli (Gulf pipefish): 125975827
Entry
125975827         CDS       T08785                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04068  FoxO signaling pathway
sscv04136  Autophagy - other
sscv04140  Autophagy - animal
sscv04621  NOD-like receptor signaling pathway
sscv04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    125975827 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    125975827 (atg12)
   04136 Autophagy - other
    125975827 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    125975827 (atg12)
   04622 RIG-I-like receptor signaling pathway
    125975827 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sscv04131]
    125975827 (atg12)
   04121 Ubiquitin system [BR:sscv04121]
    125975827 (atg12)
   03029 Mitochondrial biogenesis [BR:sscv03029]
    125975827 (atg12)
Membrane trafficking [BR:sscv04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    125975827 (atg12)
Ubiquitin system [BR:sscv04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   125975827 (atg12)
Mitochondrial biogenesis [BR:sscv03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    125975827 (atg12)
SSDB
Motif
Pfam: APG12 ATG8 XendoU
Other DBs
NCBI-GeneID: 125975827
NCBI-ProteinID: XP_049587805
LinkDB
Position
9:complement(11425881..11427418)
AA seq 117 aa
MSDNADSPTETPKEELHSPPEDSTTNEEKKKIDVLLKAVGDTPIMKTKKWAVDRSRTVQS
LSQFIARFLKMDANEQLFIYVNQSFAPSPDQEVGILFDCFGSDSKLVLHYCKSQAWG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtctgacaatgcggactcaccaacagagaccccgaaagaggagctacactcacctccc
gaagattcgacgactaacgaagagaaaaaaaagattgatgtcctgctgaaggcagttggg
gacacccccattatgaaaaccaagaaatgggccgtggacaggagcaggacggtgcagtca
ctttctcagtttatcgctcgcttcctcaagatggatgccaacgaacaactgttcatctac
gttaaccagtcgtttgcgccctcaccggaccaagaagtggggatcctctttgactgtttt
ggaagtgacagcaaactggttctgcattattgtaaatctcaagcttggggttga

DBGET integrated database retrieval system