Syngnathus scovelli (Gulf pipefish): 125975867
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Entry
125975867 CDS
T08785
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125975867 (ascc3)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125975867 (ascc3)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
125975867 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
IstB_IS21
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
125975867
NCBI-ProteinID:
XP_049587818
LinkDB
All DBs
Position
9:complement(7088026..7116655)
Genome browser
AA seq
2194 aa
AA seq
DB search
MSPPRLTGALRSFSNVTRKEDFNEKLCDLKTKRLKRRELFAKEELTWQKIFHFCTDHQDK
MKQQAVHQELKNLLAAAKQIVGSENGQEAIEHAAVFLLETFHNKDHVGTEETRGIKQMFG
PFPSSAAEVSFSCVARLVDLLRDSRIEEFIQSYCSKRKPQQGSSFGHNVAFSQECFMLEP
LDELPCFGVKDLSMSLDFTNFLNNQQSRMNVVNEGEIHPTERSLANETILRSEVDKYLSQ
GNIISSSPEDLCTSLFEMLASHKSNDELQNELFELLGPEGLEMISTLLQQRIVIVDTLLN
IPPLSQPQSDSLRKVSDEVTRPTFGCQVTIQSEQERQLMKIFRREEKKERKKGKGSDDVE
GSDALVNFDPKEMRAQREHALLTARHEPVLTRERVYERIKYPNVYDSYAEATKAPAFIGG
ARMLLPERIRRDNTKMYEEVEIPPNEPMPIGFEEKPIYISELDEIGQLVFKGMKRLNRIQ
SLVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHIQPGGVIKKDEFKIVYVAPMK
ALAAEMTNYFSKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDIA
LSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVATF
LHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKLQQMHDMEEVCYNKVVEQVKAGHQVMV
FVHARNATVRTAMALIEMAKNHGESCIFQPDHGPDYGQCEKQILRSRNKQMKEMFPDGFG
IHHAGMLRADRSLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGTLVD
LGILDVMQIFGRAGRPQFDKYGEGTIITTHEKLSHYLTLLTQQNPIESQFLDSLADNLNA
EIALGTVTNVDEAVKWLSYTYLYVRMRANPLAYGINYKALQMDPSLALYRKELVEESGRK
LDKARMIRFEERTGYFASTDLGRTSSHFYIRYNTIETFNELFNSQRTEADILSIVSKAEE
FEQLKVREEEMEELEQMLCNYCELPATGGVENGYGKVNILLQTYISRGDVDSFSLISDLS
YVAQNAARIVRALFEIALRKRWPAMTYRLLTLCKVIDKRLWGFAHPLRQFSNLSHVVLTR
LEEKNLTVDKLKEMRKDEIGHMLHHVNIGLTVKQCVHQIPSITMEASVQPITRTVLRVRL
IVTPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVTGEPQHIVFTIPIF
EPLPSQYYIKAVSDRWLGAEAICIINFQNLILPERHPPHTELLDLQPLPVKALGCPEYES
LYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEIAMFRVFNKYPSAKVVYIAP
LKALVRERIEDWKIRMEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQN
RSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANARDLA
DWLGIVQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMATMNKPTFQAIRSHSPAKPVLI
FVSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEDIIGTVRDSNLKLTLAFGIGMHH
AGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTRRYVDYPI
TDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAEIA
AGTVSSKQDAMDYITWTYFFRRLVMNPSYYSLEDIDNDSINKYLSSLVEKNLRDLECSYC
IEIKEDDRAIEPLTYGRIASYYYLKHQTIRLFKERLRAELPIHEILSILTEAEEYAELPV
RHNEDQLNSSLAQQLPLKVNPHSYDSAHTKTHLLLQAHFSHAQLPCSDYATDTKTVLDNA
IRICQALLDVAANEGWLVTALSVCNLVQMIVQGRWLHDSSLLTLPHVEQQDLYLFRKWSN
QKGRGNVECYNGPIEGLPELIATCSGKESIFAAMVGREFPSNQVTQMWAFLSHLPVLEVA
LSVKGWWEESQQQTERHLPAAGGNLREASSWLDVHADQEYVLQVSLRRINQGQQRRKQDN
KAQAPRFPKVKDEGWFLVIGEVDQKALLAVKRIGYVRNHTTVSMAFYTPEKTGRCIYTVY
LMSDSYLGLDQQYDMHLNVTPASISAQVNTEVTD
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgcggctgacgggagctctacgctccttttctaatgtcaccaggaaggag
gatttcaatgagaaactctgcgatctcaagactaaacgtttgaagagacgggagctattt
gcaaaagaagagctcacgtggcagaagattttccacttctgcactgatcatcaggataaa
atgaagcaacaagctgtccatcaggaattaaagaaccttcttgctgcagccaaacagata
gtggggagtgaaaatggtcaagaggcaattgagcatgctgctgtctttctgcttgagaca
ttccacaacaaagaccatgtgggcacagaggagactcggggcattaagcagatgtttggc
ccttttccctcttctgctgcagaagtttctttttcttgtgtggcacggctggtggattta
cttagagattctagaattgaggaatttatccagtcgtattgctccaaacgcaaacctcaa
caagggtcttcttttggacacaatgtcgccttctcccaggagtgctttatgctggaaccg
ctggacgaactgccctgctttggcgttaaagatctgagcatgagcttggactttaccaac
ttcctaaacaatcaacaaagtaggatgaatgttgtcaacgagggagagatacaccctaca
gaaagatctttggcaaatgaaactatcctccggtcagaagtggataaatatttgagtcaa
ggaaatattatatcatctagcccagaggatctgtgcacgtctctatttgagatgcttgcc
tcccacaaaagcaatgatgagctgcagaatgagttatttgagttgcttggcccagaaggt
cttgaaatgatctccacacttctgcagcagagaattgttattgttgacaccctgctgaac
atcccaccactttcccagccacagtcagattctctccgtaaagtcagtgatgaagttaca
aggcccaccttcggctgtcaggtgaccattcaatccgaacaggaaagacagttgatgaag
atattccgcagggaggagaaaaaagagaggaagaagggaaaaggatctgatgatgtggaa
ggctcagacgctctcgtgaactttgacccaaaagagatgagagcccagcgggagcacgct
ctgctgactgctcgtcatgaacctgtacttactagagaaagagtgtatgaacgcattaaa
tacccaaatgtctatgacagctatgcggaggccacaaaggcacctgcctttattggagga
gccaggatgctgcttcctgagagaatccgcagagataatactaaaatgtatgaagaggtg
gaaattccacccaatgaaccaatgcctattggttttgaagagaaacccatatacatctct
gaactggatgagattggacaactagtattcaaaggaatgaagcgtcttaacaggatccaa
tcattggtgtttgagacagcctacaacacgaacgaaaaccttctaatctgcgccccaact
ggtgctggcaagaccaacattgcaatgctgactgtccttcacgagattcggcagcacata
caacctggtggtgtcatcaaaaaagatgaattcaagatagtgtacgttgctccaatgaaa
gctttggcagctgagatgacgaactacttcagtaaacgattggagccactgggcatcact
gtcaaagaactcactggtgacatgcagctaaccaaaggggagattctacgaacacagatg
ttagtgaccaccccagaaaagtgggatgttgtgacaagaaagagtgttggagacattgct
ctctcccagatcgtacgtctcttaatcttggatgaagttcaccttcttcatgaagatcga
ggaccagtgctggaaagccttgtggcccggaccatcagacaggtggagtccacccagagt
atgattaggattctgggattatcagccactcttcccaactatctagatgtggccacgttc
ttgcacgtcaacccatatattggcctcttcttcttcgatagtcgtttcagacctgtgccg
cttggacagacctttgttggcatcaaaagtactaacaagctccagcaaatgcatgacatg
gaggaggtttgctataacaaagttgtagaacaagtcaaggctggtcatcaggtaatggtg
ttcgtccatgctcgtaacgccacagttaggacagccatggcgctaatcgagatggctaag
aatcatggagaatcctgtatctttcaaccagaccacggtccagattacggccagtgtgaa
aaacagatcctgcgctccagaaacaaacaaatgaaggagatgttcccagatggttttggg
atccaccatgcaggcatgctgcgggctgaccgcagtttgatggagaatatgttctcgaga
gggtacctcaaggtgcttgtctgtactgccaccttggcttggggagtgaacctgccagcc
catgctgttataattaaggggacacagatttatgatgccaagcgtggtaccctggttgat
cttggcatactagacgtgatgcaaatctttggtcgtgcaggacggccacagtttgacaaa
tatggggaaggcaccatcattaccacccatgaaaagctcagccattacctgactctgctc
acccagcagaatcccattgagagtcaatttcttgacagcctggctgacaacctcaatgct
gagattgctttgggtacagtcaccaatgtggatgaggcggtgaagtggctcagttacact
tacctctatgtccgcatgagggctaatccacttgcatatggtatcaactataaggctttg
cagatggatccgtcattagcgctgtacagaaaggagctcgtggaagagtcaggcagaaag
ttggacaaagccaggatgatccgatttgaggagcgcactggctactttgcctccactgac
ttgggaaggacgtccagccacttctacatcagatacaacactatagagacattcaatgaa
cttttcaactctcaacgaacagaagctgacatcctcagtattgtctctaaagctgaggaa
tttgaacagcttaaggttcgtgaagaagagatggaggagctggagcagatgctgtgtaac
tactgtgagctccccgcgacaggtggagtggaaaatggctacggcaaggttaacattctg
ttgcagacttacataagtcgtggagatgttgacagcttctcgctcatctcggacctctca
tatgttgcacagaatgctgctcgaattgtcagagcattgtttgagattgctctaagaaag
cgttggccggccatgacctatcgattgctcacactctgcaaagtcattgacaagcggctt
tggggctttgcccatcctcttcgtcagttctccaacttgagccacgttgttctgactcga
ttagaggagaaaaatctcacagttgataaattaaaggaaatgaggaaggatgaaattggc
cacatgctgcatcatgtaaacatcgggttgacagtgaaacagtgtgttcatcagatccct
tcaatcacaatggaggccagtgttcaaccaatcacacgaactgtcctgcgggtccgtctc
attgtcacacctgacttccgctggaatgatcaggtacatgggtcagtgggtgagccctgg
tggttatgggtggaggacccaatcaatgatcacatctaccactctgagtacttcctcctc
cagaaaaagcaggtggtaacgggggaaccgcaacacattgtgttcactattcccatcttt
gaaccgctaccctctcagtattacatcaaggcagtgtctgaccgttggcttggtgccgaa
gccatctgcatcatcaatttccagaaccttatcttgcctgagcgacaccctccacacaca
gagttgttggacctgcagccactgccagtgaaagctttgggatgcccggagtatgaaagc
ttgtacaagttcactcatttcaaccccatccaaacacagattttccacacactctatcac
actgatactaatgtgctattgggggcaccaacgggctctggaaagaccatagctgctgag
attgccatgttcagagtcttcaacaagtacccaagcgctaaggtggtgtatattgccccc
cttaaagctttggtcagagagagaattgaggactggaaaatcaggatggaagagaaactg
gggaagaaagtggtggaactgacaggtgatgtgaccccagatatgagagccatagcacag
gctgacctcattgtcaccacaccagagaagtgggatggagtaagcagaagctggcaaaac
agaagctacgttcagaaagtagcaatcctgatcattgacgaaatccacctgctcggggaa
gatagaggtccagtgttggaagtcattgtgtcaagaaccaacttcatctcctcccatacc
tcgaaaagtgttcgggttgtcggtctttccacggcgctggctaatgcacgagaccttgct
gactggttgggaattgtacaagtgggtttgtttaacttccgtccttctgttcgccctgtc
ccgctggaggttcacattcacggtttcccaggacagcactactgcccccgcatggccacc
atgaacaaacccaccttccaagcaatacgtagtcactctccagccaaaccagtgctgatc
tttgtctcatcccgacgtcaaacccgattgacagcactggacctcattgcatacctagcg
acggaagacaaccccaaacagtggctgcatcaggacgagagagaaattgaggacatcatt
ggcacagtgcgggattctaacttgaagctaacgttggcatttggcattgggatgcatcac
gctgggctgcatgaacgagacagaaagactgtggaggagctgtttgtcaactgcaagatc
caggttctgattgccacaagcacacttgcttggggagtaaacttccctgctcatctggtg
gtcgtcaaaggaactgaatactttgatggaaaaaccagacgatatgtggactatcccatt
acagatgttctgcagatgatgggtcgagcaggtcgtcctcagtttgatgaccagggcaaa
gcagtcattcttgtccatgacatcaaaaaagatttctacaagaaatttctctatgagcct
ttccctgttgaatccagcctcctcagtgtgctgtcagaccatttgaatgcagagatagcc
gcggggactgtctcgtccaaacaagatgcaatggactacatcacctggacttactttttc
aggcgattggtgatgaaccccagttattacagcttggaagacatcgacaatgattctatt
aacaaatacctctcaagtctggtcgaaaagaacctacgggacttggagtgctcctactgc
attgaaataaaagaggatgacagggcaattgagcctctgacttatggtcgcattgcgtca
tattactacctgaagcatcagacaattcgcttgtttaaagaaagactgagggctgaactt
cccatccatgagattctttcgattctgactgaagcagaggagtatgccgagctccctgtg
agacacaatgaagatcaactcaacagcagtctggctcaacagctccctctgaaggtcaac
ccccactcctatgacagtgcccatacgaaaacccacttactgcttcaggctcacttcagc
catgcccagttaccatgcagcgactacgcaactgataccaagaccgttctggacaacgct
atccgaatctgtcaggccttgcttgatgtagcagcaaatgaaggctggcttgtaacagct
ttaagtgtctgcaacctggtgcagatgattgtgcaaggtcgctggctgcatgattcttct
ctactgaccctgccacatgtggagcagcaagacctgtacttgttcaggaaatggtcaaac
cagaaggggagaggaaatgtagaatgctacaatggaccaattgaagggcttcccgagttg
atagctacctgcagtggaaaggaaagcatttttgcagcaatggtcggccgtgagttccct
tcaaatcaagtaacccagatgtgggccttcctcagtcatcttccagtgctggaggtcgca
ttaagtgtcaagggctggtgggaggagagccaacaacaaacagagcgccacctgcctgct
gcaggaggaaacctgagggaggcaagcagctggttagatgtccatgctgaccaggagtat
gttcttcaagtgtcactgagacgcatcaaccagggccagcagaggaggaagcaggacaat
aaggctcaggctccaagattccccaaagtgaaagatgagggctggtttcttgtcattggg
gaagtggatcaaaaggcgttgctggcagtcaaacgaatcggatacgtgcgcaaccacaca
actgtgtccatggccttttacacaccagagaagactgggagatgtatctacacagtctac
ttgatgagtgacagctacctgggtctggaccagcagtatgacatgcacctcaatgtaaca
ccagccagcatcagtgcccaggtcaacacagaggtcacagactag
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integrated database retrieval system
