Syngnathus scovelli (Gulf pipefish): 125975913
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Entry
125975913 CDS
T08785
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125975913 (lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125975913 (lsg1)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-60S particles
GTPases
125975913 (lsg1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
DUF6388
Motif
Other DBs
NCBI-GeneID:
125975913
NCBI-ProteinID:
XP_049587866
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Position
10:7828437..7832751
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AA seq
630 aa
AA seq
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MGKKKAGGALGRALIKEKFQSTRGNKKGDTWLHTSELNDGYDWGRLNLQSVTEQTSMDDF
LATAELAGTEFVAEKLNIKFVPAEARAGLLTAEEKKRLKSLHEDNKHFLRIPRRPHWDES
TSREALQQTEKDSFLEWRRQLAQLEEEQKLFLTPFERNLEFWRQLWRVIERSDVVVQIVD
ARNPLLFRCPDLELYVKEVSENKVNMVLVNKADLLTRQQRRAWARHFEKEGLRAVFWSAL
AESNRLDAEEKGVEVEQPESGESDQDDGAKPDNDLSLKGADDKEDEGEESDDWEEPRERI
TVDDEEWFTASEDEWQEEEDIVGKSNEAAFRNSARLLHKDELLEMFKMVHDGPKYKEGQL
TVGLVGYPNVGKSSTINTILRNKKVSVSATPGHTKHFQTLFVEPGLCLCDCPGLVMPSFV
STKAEMICCGILPIDQMRDHVPAVSLVCQTIPRHVLEGTYGINVIRPREDEDPDRHPTSE
ELLMAYGYMRGFMTSHGQPDQPRSARYILKDYVNGKLLYCHPPPHIEPEDFQPQHSKFQR
NDLNNCDLSASDNKGKIKRIENPVDKNFFHVENVRALSKGVQGFMGYKPGCGIVAPEKPV
TEMTEGKPWKKHGNRNKKEKVRRLTKHLDA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagaaggctggaggagcacttggcagagctctgataaaagaaaaatttcaa
tcaacccgaggcaacaagaagggcgacacatggctgcataccagtgagctgaatgatggc
tatgactggggacggttgaacctgcagtcggtgactgaacaaacttccatggatgacttt
ttggctactgcagaactggcaggaacagagtttgtagctgaaaaactcaacatcaagttt
gtaccggcagaagctagagcaggtttattgacagctgaggagaaaaaaaggctgaagagt
cttcatgaagacaacaagcattttctcagaatccctcgacgcccccattgggatgaaagc
accagccgcgaggcattgcaacagacagaaaaggacagcttcctggagtggagaagacag
cttgcacagctggaagaggaacagaagttgtttcttactccatttgagaggaatttggag
ttctggaggcagctgtggagagtcattgagagaagtgacgttgtggtacagatcgtggat
gcaagaaatccgttattgttcagatgtcctgacctggagttatatgtaaaagaggtgtca
gagaacaaggtcaacatggtgctggtgaataaggcagacctgctgacgaggcagcagagg
cgagcctgggccagacattttgagaaagaaggcctgagggcagttttttggtccgccctc
gctgaaagcaacaggttggatgcagaagaaaagggtgtggaggtggagcagccagaatct
ggagagagtgaccaagatgatggagcaaagccagacaatgacttgagcttgaagggcgca
gatgacaaggaggatgagggggaggagagcgatgactgggaggagccgcgggagaggata
accgtcgacgatgaggagtggtttactgcctcagaagatgagtggcaggaagaggaggat
attgttgggaaatccaacgaggccgctttccgtaattccgctcgcctgttgcacaaggac
gagttgttggagatgttcaagatggttcacgacgggcccaaatataaagagggacaactt
accgtcggcttggttggatatcctaatgtagggaagagttcaactatcaacaccattcta
agaaataaaaaagtgtccgtctctgcaacacctggacacacgaagcactttcagactttg
tttgtcgagcctgggctgtgcctatgtgactgccctggtctggttatgccctcctttgtc
tccaccaaagctgagatgatctgctgtgggatcctgcccattgaccagatgagagaccat
gtaccggcagtctccctcgtctgccaaacgattcctcggcatgtcctggagggcacgtat
ggtatcaacgtaatcaggccacgagaggatgaagaccctgacagacaccccacctcggag
gagctgcttatggcatatggatacatgagaggctttatgacatcgcacggccaacctgat
cagccccgatctgctcgctacatcctgaaggattacgtcaatggaaaacttctctactgc
catccacctcctcacatagagcctgaggacttccagccacagcacagcaaattccaaaga
aacgatcttaacaactgtgacctttctgcgagcgataacaaaggaaaaatcaagagaatt
gaaaatccggtggataagaacttctttcatgtggagaatgtacgagcgctgtctaaagga
gtccagggtttcatgggctacaaaccaggctgcggcatcgtggcccctgaaaaacccgta
acagagatgacagagggcaaaccttggaagaaacacggcaacaggaacaagaaggagaaa
gtgcgtcggcttaccaagcatctcgatgcctga
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