Syngnathus scovelli (Gulf pipefish): 125976081
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Entry
125976081 CDS
T08785
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125976081 (sin3b)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125976081 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF3439
Pyr4-TMTC
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
125976081
NCBI-ProteinID:
XP_049587892
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All DBs
Position
10:complement(6293521..6303903)
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AA seq
1288 aa
AA seq
DB search
MAKIQAHSTAKQINQIQDKPFVITQKQVQQQQQQQQQQHFQKLKVEDALSYLDQVKIRFA
NDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEVPKNG
IAFLQSPFSTQVSPGQQGKIVTASTMTSTSGVASATTSEAGPAHPGDSKPSSAESLSSST
SSAGPPENPSRLSLPLASRESQNQAATSSGSPPASETSPVEFDSAISYVNKIKNRFLDHP
EIYRAFLEILHTYQKEQLEVKESRGSRGTSGMTEDEVFSKVASLFKGQEDLLAEFGQFLP
DAKRSLFTGNSLTGAKEQLKRPEDDDLLTKQNKKRPRPILLPHMSPLLKKKMKYSCTKDQ
SIASVGKHGVLREFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGK
FPEVYTQFKSFLGDKELSHAMSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPK
CSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLAT
IRVLESVQKKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPA
TAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSL
LNEIESVYDERQEQSTEEGGVGQQARNGSGAASASEPHMVFTYEDKQVLEDAAALIIYHV
KRQPTIHKDDKDHIKRIIQHFVPDLFFSRRGELSDTEDWTDEEAEPEEGGERGVSAAAAT
TAPPPPPTTTTGVNANTSDGAEATATNSPSQPQPAQGQGPAQSQQQLNNESRRRRCSPPQ
PPESEACSTPGSTSQTVTTTTTSIPGGTPMETSSGATAEKVDLRDPEAEHQKELDDVYNL
FYVNNNWYFFLRLHQTLCSRLLRVYRQAERQLLEHRAEQSRERLLVAEGRREKACDLAME
LRLKQPSEVELEEYYPAFLDMVRSLLDGNLDSTQYEDTLREMFTIHAYIGFTIDKVIHNI
IRQLQHLVSDEVCLQVVDLYLAERKRGAAGGNLTSQCVRAAWETSYQWKAERAMAEENCF
KVMFIQNKGQVTMTIELQDTEEAQADDPLDIQCLSSYMEQFVGTESSLCSQADGYFFKPV
FLPRNLRRFRRWQVRQVEAMRCRREWHRQLGVENAGSLDCRFKLNTHKMVFVMNSEDYMY
RRGALVKARKSQHQVAANQHERLAKWHRGWRAEHVTPSAERSVHKWLMGEDEEDMIPCKT
TCLSTELKGQAVNRYRVHYSGSKAPASP
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatccaggcgcacagcacggcgaaacaaatcaaccaaattcaagacaagcct
ttcgttataacacaaaagcaagtgcagcagcagcagcaacaacagcagcagcagcacttc
cagaagctcaaggttgaagatgccttgtcatacctggaccaggttaaaatacgttttgca
aacgaccctggcatatacaacaagtttctcgacatcatgaaagagttcaagtcacagagc
attgacactccaggagtaataaacagagtgtcacaacttttccatggacaccccgaccta
gtattgggcttcaatgcctttctcccgccggggtatcggatagaggtcccaaaaaatgga
attgcgttccttcagtcacctttctccacacaggtgtcgccaggccaacaggggaagatt
gtcactgcctccactatgacgtcgacctccggtgtcgcgtccgccaccacctctgaagcc
ggaccagctcaccccggtgactcgaagccgtcctcggcagagtccctttcctcctcgact
tcttcagccgggcccccggaaaatcccagcagactgtcgcttccgttggcaagcagagag
agtcagaatcaggccgccacctcgtcagggtccccgcccgcctcagagaccagcccagtg
gagtttgacagtgccatcagctacgtaaataagataaaaaaccgctttttggaccaccca
gagatctacagagccttcctagagattcttcacacgtatcagaaggagcaactggaggta
aaggaaagccggggcagtcgaggtaccagcgggatgactgaagacgaagtcttttccaaa
gttgccagtctttttaagggacaagaagacctcctggctgagtttggtcaattcttgcct
gatgccaagagatcgctgttcaccggaaactcgctgacgggagcaaaagagcagttgaaa
aggccagaggatgacgacctgttaaccaaacagaacaaaaagaggcccagacccatactc
ctgccgcacatgtctccgctactcaagaaaaaaatgaagtattcctgtaccaaagaccaa
tccatcgcttctgttggcaaacatggagtcctgcgagagttctccttttttgataaggtt
cgccgcctgtttaaaagccaggaagtgtatgagaacttcctgcgctgcattgccttgttc
aaccaggaggtggtatcgggagctgagctactccagctcgtcactcctttcctggggaag
tttcctgaagtgtacacacagttcaaatcctttttgggagacaaagagctctctcatgcc
atgtcggggctgtcagatcgctacatggagggaggaggaggcagggaagtagattatgcc
tcttgcaaacgcctgggctccagctacagagcgctgcccaagacctaccagcagcctaaa
tgcagcgggcgcacggccttatgcaaagaggtgttaaatgacacctgggtgtcattcccc
tcctggtcagaggactccaccttcgtcagctccaaaaagactccttatgaggagcagctg
caccgttgtgaggatgaaagatttgagttggatgttgttctggaaaccaacctggccacc
atccgagtgctggagagcgtacagaagaagctgtcgcgcctctcgcccgaggaccaggat
cgcttccggctagacgactgcctgggcggcacctctgaggtcattcagcgccgcgccgtg
taccgaatctatggcgacaaggctcccgagatcatcgaggggctgaagaggagtccggcc
acggcagtacccgtggtgctcaagaggttgaaagccaaggaagaagagtggagagaggcc
cagcagggtttcaacaagatctggagggagcagtatgagaaggcctacctcaagtccctg
gaccaccaaggagtcaacttcaaacaaaatgacatgaaggctctgcgctcaaagagtctc
ctcaatgagatagaaagtgtctatgatgagcgacaggaacagagcacagaagagggcggt
gttggccagcaggctcgcaacggctccggcgcagcatcggccagcgagcctcacatggtg
tttacgtatgaggacaagcaagtcttggaggatgccgccgcgctcatcatctaccacgtc
aaacgccagcccaccattcacaaagacgacaaggaccacatcaagcgcatcatccagcac
tttgtgcccgacctgttcttctcgcgccgcggtgagctcagcgacacggaggattggact
gatgaggaggcggagccagaggagggaggagaacgaggagtgagcgcagcagcagcaaca
acggcaccaccaccaccaccgacaacaacaacaggagtgaatgccaatacttctgatgga
gcagaagcaacggcaacgaatagtccgtctcaacctcaaccagcccaaggtcaggggccg
gcccaaagccagcagcaactaaacaatgaatccagaaggaggcgctgcagcccaccccaa
ccaccagagagcgaggcttgcagtactcctggtagcaccagccaaacggtgaccacaacc
accacatctatccccggaggcacgcctatggagaccagttcaggcgccactgctgagaag
gtagacctgcgtgaccctgaagcagagcaccagaaggagctggacgacgtctacaacctg
ttctacgtcaacaacaactggtacttcttcctgcggctgcaccagactctgtgctcgcga
ttgctgcgagtgtatcgacaggccgagcggcagctgctggagcaccgcgccgagcagagc
agggagcggctgctcgtggccgaaggcaggcgggaaaaggcatgcgacctcgccatggag
ctgcgcctcaaacagccaagtgaggtggagttagaagagtactatccagccttcctggac
atggtgcgcagcctgctggacggcaaccttgactcgactcaatacgaggacacactgcga
gagatgttcaccattcacgcttacatcggcttcaccatcgacaaggtcatccacaacatc
atccggcagctccagcacctggtgagcgacgaggtgtgtctgcaggtggtggatctgtat
ctggccgagaggaagaggggggctgccgggggaaacctcacttctcagtgcgtgcgagcc
gcctgggagacgagctaccagtggaaggctgagagagccatggctgaggagaactgtttc
aaggtgatgtttattcaaaacaaaggtcaagtgacaatgactattgagctgcaggacact
gaggaggcccaggctgatgaccccttagacattcagtgcttgtccagctacatggagcaa
tttgttggaactgagtctagtctgtgttcacaagcagacggctacttttttaaaccggtc
tttcttccacggaaccttcgtcgtttccggcgttggcaagtgcgtcaggtggaggcgatg
cgctgccggcgagagtggcaccggcaactgggtgtggagaacgccggcagcctggactgt
cgcttcaagcttaacactcacaagatggtgtttgtgatgaactccgaggactacatgtac
cgcagaggagcgctggtcaaggccaggaagtctcagcaccaagtggcggcaaaccagcac
gagcgcttggccaagtggcaccggggctggcgggcagagcacgtgacgccctcggccgag
cgcagcgtgcacaagtggctgatgggagaggacgaggaggacatgatcccctgcaagacc
acctgcctgtccacggagctcaagggccaggcagttaacagataccgcgttcattacagc
ggtagcaaagcccccgcctcgccttaa
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