Syngnathus scovelli (Gulf pipefish): 125976088
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Entry
125976088 CDS
T08785
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X2
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125976088 (rnf4)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125976088 (rnf4)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125976088 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-rbx1
zf_RING_Vps8
zf-RING_4
zf-C3HC4_3
IBR_1
Rtf2
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125976088
NCBI-ProteinID:
XP_049587910
LinkDB
All DBs
Position
1:29459960..29463524
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AA seq
280 aa
AA seq
DB search
MRDAIVSMSLSNRAGILVNLPFLTSHCCTFNVTVSLRQRPMSAFDVPTETVRLRSPRRAE
VTKPRREPTPAVQRKRRRVENPIVSSNPKPCRANRAAHAHRRSNANSVANRRARPRGRSA
SGPPADAETIDVMDNQENGVEEVVDLTSETAEASHVVDLTNNDSVLLVDEGPQSRRNTTG
ESYVVSSDDDDDDTSPAVPRVDFLTSLRRQSSVRCTPGTISCPVCMDTYSEMVDSGRLVV
STKCGHVFCSQCLRDALRCSLTCPTCRKRLTPRQYHPLYI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatgcgatagttagcatgagccttagcaatcgggcgggaatccttgtgaacttg
cctttcttgacgtcccactgttgcacttttaacgtgacagtctcattacgtcagcgaccg
atgtccgcttttgacgttccaactgaaactgttcggctacgatcaccacgacgagcagaa
gtgacgaagccgaggagagaaccaacgccggctgtgcagaggaagagacggcgtgtggag
aacccgatcgtctccagcaaccctaaaccttgccgcgctaacagagcggctcatgctcac
agaaggtccaacgctaatagcgtggccaatagaagagccagaccccgagggaggtcagcg
tccggcccgcccgccgacgccgagaccatcgacgtgatggacaaccaggagaacggcgtt
gaggaggtggtggacctgacgtccgagacagcagaggcctcgcatgttgtcgacctcacc
aacaatgactctgtgctgctggtggacgaaggtcctcaaagcaggaggaacaccacggga
gaaagttacgtcgtgagcagcgacgacgacgacgacgatacctcgcctgctgttccccgt
gttgacttcttgacctcgctgcggaggcagagctccgtcaggtgtacacctggaaccatc
agctgtccggtgtgtatggacacctactcggagatggtggacagcgggcgtctggtggtg
tccaccaagtgcggtcacgtcttctgcagccagtgcctgcgagacgccctgcgctgctcg
ctcacgtgccccacgtgccgcaaacgcctcacgcctcgccagtatcaccccctctacatc
tga
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