Syngnathus scovelli (Gulf pipefish): 125976105
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Entry
125976105 CDS
T08785
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125976105 (rnf13)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125976105 (rnf13)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125976105 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
FeoB_associated
zf_RING_Vps8_fungal
zf-RING_4
PHDvar_NSD
PHD
RINGv
zf-RING-like
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
125976105
NCBI-ProteinID:
XP_049587948
LinkDB
All DBs
Position
10:8049048..8068065
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AA seq
376 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADIAAYSFDNNSKTFDDLPSRFGYRLP
SDGLKGFLIGAQPANACQPIEPPPRDNSTGAFVVLIKRFDCNFDIKVLNAQKAGYKAAIV
HNVDSDDLISMGSNDLDIMKQIDIPSVFVSEKTAKSLKDDYLFDKGGRVLLMPDFSLPLE
YYLIPFLIIVGICLILIVGFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGDIYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQDDSDSEEGGGDD
EASESTPLLRSLASTSAHSFGTMSAASQANRDQESSSDSDSLYESSDTEEEVTVESVVFV
QMPQSNPEGNNNMLQA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtccctgggaatgctgatgctgtcggccacgcagatctacaccatcttcact
gtccagctctttgctttcctcaacctgctgcccgtggaagctgatatcgcagcttactca
tttgacaacaattcaaagacttttgatgacctcccatcgaggtttggataccgacttcct
agcgatggattgaagggtttcctgattggcgcacagccagcaaatgcatgccagcccatc
gagcccccgcccagggacaactcgacgggcgccttcgttgtccttatcaagcgctttgac
tgcaacttcgatattaaggtcctcaatgcacagaaagctgggtacaaggcagccattgtt
cacaatgtggactccgatgacttgatcagcatgggctccaacgatttggacataatgaag
cagattgacattccttccgtgtttgtgagtgaaaaaacggccaaatctctgaaagatgac
tacctgtttgacaaagggggtcgtgtgctcctcatgccagacttcagccttccgctagag
tattacttgatccccttcctcatcatagttggaatctgcctcatcctcattgttggcttt
atgatcacaaagtttgtccaagatcgccacagggctcgaagaagccgcctccgtaaagat
cagttgaagaaacttccgatccacaagtacaaaaaaggagacatctatgacgtgtgtgcc
atttgcctggatgagtacgaagaaggagacaaactgcgggtcctgccatgttctcatgcc
taccacagcaagtgcgtggacccatggctgaccaaaaccaagaagacgtgtcccgtgtgc
aagcagaaagtggtcccctcgcaggacgactcggactctgaggagggcggcggtgacgat
gaggcgtccgaaagcaccccgctgctgcgctcactagcctccaccagcgcccactctttt
ggcaccatgtctgctgcgtctcaggccaatcgggaccaggagtcgtcttcggactctgac
tcgctgtatgaaagcagcgacacggaggaggaggtcaccgtggagagcgtggtgtttgtc
cagatgccgcagtcaaacccggaaggcaacaacaacatgcttcaagcttga
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