Syngnathus scovelli (Gulf pipefish): 125976131
Help
Entry
125976131 CDS
T08785
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125976131 (syde2)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
125976131 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
125976131
NCBI-ProteinID:
XP_049588012
LinkDB
All DBs
Position
10:complement(341308..363147)
Genome browser
AA seq
1589 aa
AA seq
DB search
MADPLRRTLLAKLRGKKNKKGETLRAGLGLSSATAATAATANEGREGKEKVLQMQREPVE
AHPVVVTLSGMDYAAAAERMSTYENCFDGPVAQSTGVDLLRLSASAEIAGSRPPLLSSGG
TGRLNGQLPGAGSLHFAIPDAHAAHWEHACDDTITMSFGETTPGRRRKRRKKYFISVPWQ
CSVGDSIGFGDNSYHIYSYAPSVHRTTSRCQPLVQKESASVLAVNTARKANEQSLDTANP
VPAQTEETFVEILEPAHSGDSRGRLRSPAFFPTELHLCDISVASVVKHPLDSEDDDYYDN
EILPFYESRRKSAGDGGDVMTPPPQMVQDEGQADESRGAQETDRLRNQLKEAYYLLINAM
NGIHLEQQALSQRHSTSSCSSRSRDSLCSGARNVDSDSWSSGGAQPVSDTDSLLLCLAGG
NIQSGLKSRLDSKSLLNLSSTQVKATLVRSASEGDIRRPLGPLQRIHPLGKGPDLISELR
SDEDSDDAEVRRAHELPPVFNAGDHDEPFQAVGEVVESSGSLDSLTGSSDGNPDGWAPPA
HDNKLAQGGNLVNKGYGVTVNKMQEWMHKGRLLSSEMKQRIEGPCHRASPTVKSLTSPAS
KTAQLSAALTENAPWQEAARANELSAWRPHLHTITVGKKRNWLQQSTLGNNHCTKDELQA
GKPGAEEELGLAYSQPQQPPPPPPPPSPSPEQLTSSGGAPPASRPAHLHLPEVSVDPAEE
NDADDEGEIWYNPIPEDDEPEVSNRASVRLLDSNGRTLESGGPDSLGEGNAGHWTDRQKA
QEEGGPCTSKSVDVPDFPNSVGFSPPSSPNPTKKSSSINWSFPDKIKSPRTVRKLSMKMK
KLPELSRKLSVKGQSSGGGGNGGAPSEPRSQSLRAPAVGIEATCPQRSALSGAGLASRNV
ISRYHLDSSVSTQHSFGKKKNNGGGAGVGAGVGGGGSKSASKGGYLSDGDSPELVAKSGK
RTSVEAKECRYNHVEGASGSSKANGTDLDIDAFRHYSFTEQPKCSQYISGLMSLHFYGAE
DLKPPRVDSRDVYCAIQVDSVNKARTALLTCRTTFLGMDHTFNIELENAQHLKLVVFSWE
PTPRRNRVCCHGTVVLPALFRVIRSHQLAVKLEPRGLIYVKLNLMEHWQNSLDGGADGGR
EHQVFGVEAWRVVEREDTGLPVPLLISKCITEIEKRGCQVVGLYRLCGSAAVKKELREAF
ERDSYAVGLCENTYPDINVITGVLKDYLRELPYPLITKQLYEAVLDSMAARPLRMGAAGC
ENDHADSEHTVGLLDILPEVERMTLRKLLDHLKLVASYQEVNKMTCQNLAVCFGPVLLSQ
RQEASCHTNRVFIDSEELASALHFKKHIEVLHYLLQLWPVVDLPNQPSSPEGLDSLTMVP
PLRRRKERPHVLNLTEAGMAGVLRPKAGRLDSPSNRYAGDWSGCGDSYFPAETLPLPHGK
EEADYDDVPSEDTDGDEGLEKPDCADDDAAAARELPGPDEHSQTLSEEEDVVAAAEEEQP
DETDEDEAKQDKNEGSGNRRLSEEKESACEHILPRRLHKEHAYQTYMKIQDISPVLSNRV
NLRDLQESIDTLIGNLERELNKNKINVGY
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcgaaactccgtgggaaaaaaaacaagaag
ggagagacgctccgcgctggattgggattgagctccgccactgccgccactgccgccacc
gcgaatgagggccgagaaggtaaagaaaaagttttgcaaatgcagcgagagccggtcgag
gctcacccggtggtagtcacgctatcaggcatggattacgcagccgcagcggagagaatg
agcacgtacgagaattgttttgacggcccagtggcgcaaagcacgggggttgacttgctc
cggctgagtgcgtcagcggagatagccggctcacgtccgccgttgctcagcagcgggggc
acgggcaggcttaatgggcagctcccgggggcaggctcacttcactttgccattccagac
gctcatgcggcccactgggagcacgcgtgcgatgacaccatcaccatgtcctttggagaa
acaacgcctggccggaggaggaagaggaggaagaaatacttcatctcggtcccatggcaa
tgcagcgtgggggattcaattggcttcggggacaattcctatcatatttattcctatgca
ccgagtgtgcaccgcactacttctcgttgccaacctcttgtccaaaaggagtcggcaagt
gtccttgctgtcaatacagcacgtaaggccaacgagcaaagtttggacacagcgaatccg
gtccctgctcaaacagaagaaaccttcgttgaaatcctcgagcccgcacactcgggggac
tccaggggccgtctgcgaagcccggccttcttcccaactgagctccacttatgcgacatt
agcgtggcatccgtggtcaagcatcctttagacagcgaagacgacgattattacgataat
gagatcctgcccttctacgaaagcagacgcaaaagcgcaggcgacggaggagacgttatg
acgccgccgcctcagatggttcaggatgaagggcaggctgacgagagccgcggcgcccag
gaaacagacaggctacgcaaccagctgaaagaggcttattacctcctgatcaacgccatg
aatggtatccatttggagcagcaggctttaagccagcgtcacagcacctcctcctgtagt
agccgctccagggacagtttgtgctcgggggccagaaacgtggacagcgactcctggtcc
tctgggggcgcccagccggtgtctgacacggattccttgctcctgtgtctggccggagga
aacatccagtcaggcctcaaaagcagactagacagtaagagcttgctcaatctcagctca
actcaggtcaaagctactttagtgcgctctgctagcgagggagacatcaggcgtccactt
ggacctttgcagcgcatccatcctctcggaaagggtccagacctgatttcagagctaaga
tcagacgaggacagcgacgatgctgaagttcgaagagcccatgagctgccgccggtcttc
aacgctggcgaccacgacgagccttttcaagcggtcggcgaggttgttgaaagcagcggt
tcgctcgacagccttacgggttcttcggatggcaacccggacggatgggcgcctcctgct
cacgataacaagctagcgcaggggggcaacttagttaacaagggctacggcgtgacggtc
aacaagatgcaagagtggatgcacaaaggtcgcctgttgtcgtctgaaatgaagcaacgc
atagaaggtccctgtcatcgggccagcccaacggtaaaatctctcacgtcccctgcgagc
aagacagcgcagctttcagcagctctcactgagaatgccccatggcaagaggctgccagg
gccaatgagctttcggcgtggcgaccgcacctccacaccatcacagtcggcaagaagcgc
aactggctgcagcagagcaccctcggaaacaaccattgcactaaggatgagctgcaagct
ggcaagccgggagctgaggaggagctcggcctggcctactcacagccacagcagccgccg
ccgccgccacctccgcccagtccttctccggagcaattgacaagttcagggggggcaccg
ccagcttcgcggcccgcccacctgcatctacccgaggtgagcgtggacccagcagaagag
aacgatgccgacgacgaaggcgagatctggtacaaccccattcccgaggatgacgagccg
gaggtgtccaacagagcctccgtccgactgctcgacagcaacgggaggaccttggagagc
ggcgggccggactcgctcggggaaggaaatgccggccattggacagacagacagaaagct
caggaggagggagggccctgcaccagcaaatctgttgatgttcccgactttcccaatagt
gttggattctcccctccttccagcccaaaccctactaagaagagcagctccatcaactgg
tcattcccagacaagatcaaatccccccgcaccgtcaggaaactttccatgaagatgaag
aagcttccagaactcagccggaaactcagcgtcaagggtcaaagcagcggcggcggcggc
aatggaggtgctccttcagagcccaggtcccaatcacttcgcgctccagctgtggggatt
gaagccacttgccctcagcgatcggctctatctggcgccgggctcgccagccgaaacgtg
atctcacgctaccacttggacagcagcgtgtccacgcaacacagcttcggtaagaagaaa
aacaacggcggcggcgctggcgtcggcgctggcgtcggcggcggcggctccaaatctgcc
agtaaaggtggatatttaagcgacggcgattcaccggagctggtggccaaatccgggaag
cgcacttccgtcgaggccaaggaatgccgatataatcacgtggaaggagcgagcggaagc
tccaaagcaaacggtaccgatttggacatcgatgctttccgccattacagcttcacagag
cagcccaaatgtagccagtacatctcgggactgatgagcctgcacttttacggcgccgag
gacctcaaaccgcctcgcgtggactctcgcgatgtctactgcgccattcaggtggactcg
gtcaataaagcacggacggcgctccttacctgccgaactaccttcttgggtatggaccac
accttcaacatcgagctggagaacgcccagcatttgaagctggtggtgttcagctgggag
cccactcccaggagaaaccgtgtctgctgccacggcacggtggtcctacccgcgctcttc
agggtgatacgctcccaccagctggcggtcaagctggaaccccgcgggctgatatacgtc
aagttgaacctgatggagcactggcagaattccttggatggaggcgcagatggcggcagg
gagcaccaagtctttggtgtggaggcgtggcgggtggtggagagggaagacaccggactc
ccggtgccgctgctgattagcaaatgcatcactgagattgagaagcggggttgccaggtg
gtggggctgtaccgtctttgcggctctgcagctgtaaagaaggagctacgcgaggccttt
gagagagacagttatgccgtgggactgtgtgaaaacacctatcctgacatcaacgttatc
acaggcgtattaaaggactacctacgagagctgccctaccctctcatcaccaagcagctg
tacgaggccgtattggactccatggccgccagacctctgaggatgggagcagccggttgc
gagaacgaccacgccgactccgaacacaccgtgggcctgttggacatccttccggaagtg
gagaggatgacgttgcggaaacttcttgaccacctgaagctggtggcgtcctaccaggaa
gtgaacaagatgacatgccagaacctggccgtgtgttttggccccgtgttgctcagccaa
cgtcaggaggcatcttgtcacaccaaccgcgtcttcatcgactccgaggaactagccagt
gcgctgcacttcaagaagcacattgaagtcttgcactacttgctgcagctctggccagtg
gtggaccttcccaatcagccctcctcccctgaaggcctggactcgctgacaatggttcct
cccctgcggcggagaaaagagcggccgcatgtgttgaacctcaccgaagcggggatggcg
ggggttctgcggcccaaagcgggacgcctggacagcccgagcaaccgctacgccggcgac
tggagcggctgcggcgacagctacttccccgccgagacgcttccgctccctcacggcaaa
gaagaggccgattatgacgacgtgccctcggaggacacggacggagacgaggggcttgaa
aagcctgactgtgccgacgacgacgccgccgccgcgcgggagctccctggccctgatgag
cactcgcagactctgagtgaggaggaggatgtggtggcggcggctgaggaggagcagcca
gacgagactgatgaagacgaggcaaagcaggataagaacgagggttccggcaacaggcgg
ctgtcggaggagaaggaaagcgcgtgtgagcacatcttgcctcggcgcctgcacaaggag
cacgcgtaccaaacttacatgaagatccaggacatcagccccgtgttgagcaacagggtg
aacctgagagaccttcaggagagcatcgacacactcatagggaacctagaaagagaactc
aataagaacaagatcaacgtggggtactaa
DBGET
integrated database retrieval system
