Syngnathus scovelli (Gulf pipefish): 125976179
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Entry
125976179 CDS
T08785
Name
(RefSeq) calreticulin isoform X1
KO
K08057
calreticulin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04141
Protein processing in endoplasmic reticulum
sscv04145
Phagocytosis
sscv04148
Efferocytosis
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125976179
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
125976179
04148 Efferocytosis
125976179
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125976179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sscv03110
]
125976179
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sscv04091
]
125976179
Chaperones and folding catalysts [BR:
sscv03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
125976179
Lectins [BR:
sscv04091
]
L-type lectins
125976179
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calreticulin
DUF8634
Motif
Other DBs
NCBI-GeneID:
125976179
NCBI-ProteinID:
XP_049588114
LinkDB
All DBs
Position
10:complement(11327258..11334172)
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AA seq
405 aa
AA seq
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MPPAVLALLAALACSVHATVFFKEKFLDGDGWRNRWVESKHKDDYGQWKLSAGKFYGDAE
LDKGVQTSDDAHFYALSARMKSFSNEGKVLVIQFSVKHQQGLDCGGGYVKIFDAQLDQAQ
MNTRSSFYIMFGPDICFSATKKVHVILNYKGQGHLIKKNIPCKNDKLSHVYTLVLRPDQT
YQVKIDNSEVASGSLEDDWDLLPPKTIKDPLASKPADWDDRPTMDDPDDTKPEDWDQPET
VPDPKHRKPSDWREDIDGVWKPRVIANPDYKGDWMPRQIDNPKYKGPWVHPEIANPEYVH
DADMYKFHNIGVLGLELWQTKAGSIFDNFLITDNVQEAEEFAQQTWGLTQAAEKKMKEEQ
DELERKKWEEEEQDNNRKDDKDFDFDFGDHAGDDKEVRTIKNTEL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgctgtcctcgcgctcctggccgcgctcgcctgcagcgtccatgccactgtt
ttcttcaaggagaagtttctcgacggagacggttggagaaaccgatgggtggagtccaag
cacaaggacgattacggccaatggaagctgagcgccgggaaattctatggtgacgctgag
ctcgataaaggtgtccagacgagcgatgacgcacacttctacgcgctgtcggcgcgcatg
aagtcgttcagcaacgagggtaaagtcctggtgatccagttcagcgtcaagcaccagcag
gggctggactgcggcggaggctacgtcaaaatctttgacgcccaactcgaccaggcccag
atgaacacccgctcgtccttctacatcatgttcggtcccgacatctgcttctcggccacc
aagaaagtgcacgtcatcctcaactacaagggacaaggacaccttatcaaaaaaaacatc
ccgtgcaagaacgacaagctgagccacgtgtacactctggtgctgcgtccggaccaaacg
taccaggtgaagatcgacaactcagaggtggcgtcgggctcgctggaggacgactgggac
ctgctgccccccaagactatcaaagaccccctggccagcaagccggccgactgggatgat
cggcccaccatggacgacccagacgacaccaagcccgaggactgggatcagccagaaacc
gtcccagaccccaaacaccgcaaacccagcgactggcgagaggacattgatggcgtgtgg
aagcctcgcgtgattgcaaatcccgactacaagggcgactggatgcccaggcagatagac
aaccccaagtacaaaggcccatgggtccaccccgagatcgccaaccccgagtacgttcac
gacgccgacatgtacaaattccacaacattggcgtgctgggattggaattgtggcagacg
aaggccggatccatctttgacaacttcctcatcactgacaatgtccaagaagcagaagag
tttgcccagcagacttggggactcacgcaggcagccgagaagaagatgaaggaggagcaa
gatgagctggaaaggaagaagtgggaggaagaggagcaggacaataacaggaaagacgat
aaagattttgactttgactttggtgatcatgctggtgatgacaaggaagtgcggacaatc
aaaaacactgaactgtag
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