Syngnathus scovelli (Gulf pipefish): 125976240
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Entry
125976240 CDS
T08785
Symbol
celf5a
Name
(RefSeq) CUGBP Elav-like family member 5a isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125976240 (celf5a)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125976240 (celf5a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
125976240
NCBI-ProteinID:
XP_049588228
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Position
10:5049571..5185483
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AA seq
544 aa
AA seq
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MARFTQTETRRQNPPPPPLPPPPPPQQHPAPHSSSLLLSGPSPAPLLLLPHHQSQYHHQY
VQIPLPKPMNGSEPISLHPESGAMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELT
VLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKL
FVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAIGALHG
SQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAIALPFSTYSSYAHALMQQQA
AIMAASHGGYLTPSVAAFPATQIHQMGALNINSLPHTPMTPVSGEFHQALGLSSPPANIT
TSAVPSIVTPIVNGFTGIPHQPNGHPAVETVYTNGLPPYSTQSPTAADTLQQAFTGVQQY
TAIYPATTLTPIGQTLPQAPQVIQQQQQQQREGEGPEGCNLFIYHLPQEFGDNELMQMFL
PFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDA
SRPY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccagattcactcagactgaaacaagaaggcagaatcctcctcctcctcctcttcct
cctcctcctcctcctcagcagcatcccgctccacactcctccagcctgctcctcagcgga
ccgagcccggcaccactgctcctgctcccgcaccaccagtcccagtaccaccaccagtac
gtccagatcccactgcccaaacccatgaacggctcggaacccatttcacttcatccggag
agcggcgccatgaaggaccaggatgccattaagctgtttatcgggcagattccgcgcaac
ttggaggagaaggacctgaagcccctctttgaacagtttgggaagatccacgaactgaca
gttctcaaggaccgctacaccggcatgcataaaggttgtgcgttcctcacctactgcgcc
cgagagtccgccatcaaagcccagaatgccctccacgaacagaaaacactgccagggatg
actcgtccgatccaggtgaaaccggccgacagcgagagccgtggagaagacaggaagttg
ttcgtggggatgctcaacaagcaacagacagaggaagacgtctaccgcctattcgaaccc
tacggagtcatcgaggagtgcacggtcctaagaggtcctgacggcaacagcaaaggttgc
gcctttgtcaagttctccacacataccgaggctcagtcagcaattggtgccctacacgga
agtcagacaatgccaggtgcctcctccagcctggtggtcaagttcgccgacacagacaag
gagcgcaccatcagacgcatgcagcagatggtcggccagtttggcatcttcaaccccgcc
atcgcccttcccttcagcacctacagctcttacgcacatgcgctcatgcagcagcaggca
gccatcatggcagcgagccacggcgggtacctgacgccgagcgtggccgccttccctgcc
acgcagatccaccagatgggggcgctcaacatcaatagcctgccacacactcccatgacc
ccggtgtcgggtgagtttcatcaagccttgggtctaagttctccaccagccaacatcacc
acctccgccgtgcccagcatcgtcacgcccatcgtcaacggattcaccggcatccctcat
cagcccaacggacaccccgccgtggagacggtctacaccaacggcctgccgccttactcc
acccagagtcccactgccgccgacaccctgcagcaagccttcaccggtgtacagcaatac
acagcaatctacccggccaccacgctgactcccattggccagacgctgccccaggcgccc
caggtcatccagcagcagcaacagcagcagagagaaggtgagggtccggagggctgcaac
ctgttcatctaccacctgccacaggagtttggagacaatgaactcatgcagatgtttctg
cccttcggcaccgtcatctcatctaaggtcttcatggaccgggcgaccaatcagagcaag
tgttttggctttgtgagcttcgacaaccccgccagcgcgcaggcagctatccaggccatg
aacggctttcagattggcatgaagaggttgaaagtgcagctaaagagaccgaaggatgcc
agtcgcccttactga
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