Syngnathus scovelli (Gulf pipefish): 125976254
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Entry
125976254 CDS
T08785
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125976254 (sox2)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125976254 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125976254
NCBI-ProteinID:
XP_049588256
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All DBs
Position
10:complement(10494460..10554758)
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AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNGNTAAGNQKNSPERVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGVGGGLGGGVNQRMDTYAAHMNGWTNGGYGMMQEQLSY
QHPGLNAHNAGQMQPMHRYDMSALQYNGMSSSQSYMNGSPTYSMSYSQQSTPGMTALGSM
GPSSVVKSESSSSSPPIVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEQTAQTRLHMSG
HYQSTVPGTTINGTLPLTHMKL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagacagaactgaagcccccggccccccagaccaacacggggggc
acgggcaacggcaacacagccgctggcaaccagaaaaacagccccgagcgggtcaagaga
cccatgaatgctttcatggtgtggtcgcgcggccagaggaggaagatggcgcaggagaac
cccaaaatgcacaactcggagatcagcaaaagactgggcgccgagtggaaacttctgtcg
gagagcgagaagcggcccttcatcgacgaagccaagcggttgcgggccctgcacatgaag
gagcaccccgattacaagtaccggccccggcggaagaccaagaccctgatgaaaaaggac
aagtacaccttgcccggcgggctgctggcgccgggcggcaacggcatgggcgcgggggtc
ggcgtcggcgtgggcggcggcctgggcggcggcgtcaatcagcgcatggacacgtacgcc
gcgcacatgaacggctggaccaacggcggctacggcatgatgcaggagcagctgagctac
cagcacccgggcctgaacgcgcacaatgcgggccagatgcagcccatgcaccgctacgac
atgagcgcgctgcagtacaacggcatgagcagctcgcagagctacatgaacggctcgccc
acctactccatgtcctattcgcagcagagcaccccgggcatgacggccctgggctccatg
gggccctcgtcggtggtcaagtccgagtcgagcagctccagtccgcccatcgtcacgtcg
tcctcgcaccgggccgcgccgggctgccaaagcggcgatctgagggacatgatcagcatg
tacctgcccggggcggaagtcagcgagcagactgcccagaccagactacacatgtccggc
cactaccagagcaccgtgcccgggacgacgatcaacggcacgctgcccttgacgcacatg
aagctctag
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integrated database retrieval system
