Syngnathus scovelli (Gulf pipefish): 125976259
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Entry
125976259 CDS
T08785
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125976259
Membrane trafficking [BR:
sscv04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125976259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
125976259
NCBI-ProteinID:
XP_049588262
LinkDB
All DBs
Position
10:complement(3269342..3283520)
Genome browser
AA seq
1478 aa
AA seq
DB search
MAAREITVFGFASVNKDITDSIRKIIEKSTIKFICGIKLDTKSGKTEDRILVLATWRLYF
LAPKIPAKVETTFNFLEIRALNSHPDHQVVIDTDKSTCCLRFESRDHLNHVVSHINYALS
RIFNNSVFAPSICHSDSDLSEGSRKYSPSSETSVETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLLDFSHLESRDLAVIVASVAYNTWFTKLYCKDLRLGSEVTE
QVLHTVSKSSSLEEITLENVGLKSDFPQKMSTALSENPAAVIHSLNLAHNSLDNQGVASL
IQQMCHLSKGLRLLNLSKTSLTSKGVVSLSMALNSSDEYSNSLLHLDLSKNPGVLSGDDA
SSLYLFLSHPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSFLNLSKNSFSNSRKGKDTL
PLFRQFFSSAFSLTHVSLAAMKLPPDVFRALLLGLTSNPHISDLHLDISGCELRCAGAAV
LQELFPRVSSISTLDISDNGLDADLLTVLPALSRHHSLKHLHLGKNFNIKNRVLDEVLQK
LVQLIQEEECALQTLSLTDSRLRSRGTVLVNALGSNTCLRKVDLSGNNMDDIGAKMLSKA
LQINTTLRSVTWDRNSTSAAGFLDVARALEHNFTLQYMPLPLSDISQAYRSAPERTEQAL
TKIQRALVRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLCARVQQQVCLLRGVGEAEDI
QAAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDSLAGELAKAADKELQVIVDSMV
SLCRELCPLSSAAAERLSPPLSSVSDRVSVPRATIRTALMERAAQDVHRALEEVKLSVVS
YLTNSIVDQILQELYATHKTLTRQVSHLKRWDGSCEDGTGWRFNRHRDSLDITEEELGTS
IDTIAIKKRSSRTRRIRPVSTRLSLCDDSSSSPPPSIPSYSTPLSRSTSWEGLSELPTQG
LPLHHVTRVRPRPPRRHKGGYLPAETQCSENGGISPLDDGLPDFYTKRVLPDSQLSSLHN
THSLRRKKRRNVLAIFGFRRNRNQTNQESDVDFYGEHAVATAPSGAATENVYTLLQPPRA
KAGSPGDRPDGKNTLVLSLPPPMSGIPYSVMAGSKHPFYSPIERSEKDAGPGDHPPKEAD
KYWADDKQRTSEVLQAEDIWLDTRTGERHVERRRSDERPGEAWTVDRHPDRQIDRQWTAE
RHTQWQIDRKMERQRLGGRQIDRSWSEGKQTDVQLDAQLTDRSVWKPDRHHFTPRPLPPY
PSDRTPSPKQEVSAEVDAQGERRVSPDSCPEGWRSGYGGRAAPKPEPPPQSSKPNLSKLR
QRHRVESSDTLPEEDDDVQREPAKKDQEKRRDQETQPPPIPEKPKATSYVTFLKEPAPER
SLPPPPLPPPFGRHAHGLPDRAASQGEEGLRPQAPIKPQRNRKAMSCDAGTDRDSPNSIE
KPPNRKPPEKKPRLPQNRNKSLDLSDSFNSTHGHSELV
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggccgctagagagatcaccgtttttggctttgccagtgtgaacaaggacatcacagac
agcatcaggaagatcatcgagaaatcaaccatcaagttcatttgcgggattaagctcgac
accaagagtggtaaaaccgaggaccggattctggtgctggcgacctggcgtctctacttc
ctggcgcccaagattcccgccaaggttgaaaccacgtttaacttcttggagatccgagct
ttgaattcacaccccgatcaccaggtcgttatcgacaccgacaagtcaacctgctgcctg
aggttcgagtcacgtgaccacctcaaccacgtggtcagccacatcaattatgcgctctca
cggattttcaacaactcagtgtttgcaccttccatctgtcactccgatagcgatctctcc
gagggcagcaggaagtattcgcccagctcggagacgtcggtggaaactcagcgggcctgc
ggaggattttcagaaacgtacgccgcgctgtgtgactataatggcatcagctgcaaggag
gaagtgcagtgggacgtggacaccatctaccactcccaggacaaccgtgagtttaacctg
ctggactttagccaccttgaaagcagggatctggcagtgattgtcgcatcagtggcgtac
aacacgtggttcactaagctgtactgcaaagacctacgcttgggctcggaggtgaccgag
caggtcctgcacacggtcagtaaatcatccagccttgaagagatcacgctggagaacgtc
gggttgaaatcagacttcccacagaagatgtcgaccgctctctcggagaaccccgccgct
gtcatccactcgctcaacctggcccacaactctctggacaaccaaggcgtggccagtctg
atccagcaaatgtgccacctcagcaagggtctgcgtctcctcaacctctccaagacctcg
ctcacctcaaaaggggtggtgtcgctttctatggcgctcaactccagtgacgaatactcc
aactcgcttctgcacctggacctgagcaagaaccccggagtcctgtccggggacgacgcc
tcgagcttgtatctgtttttgtcgcatcccaactgcctggtgcatctggatttgtcgggc
acagattgctctgtggactcactattcggggctctactgaggggctgttgcgctgatctc
tcctttctcaatctttccaaaaattccttctcaaacagcaggaaagggaaggacacactg
ccgttgttccgtcagttcttcagctccgccttcagcctcacccacgtcagcctggccgcc
atgaaactcccccctgacgtcttcagggctctgctattgggcttaacctccaaccctcac
atcagtgaccttcatctggacatcagtggctgtgagcttcgatgtgctggcgctgccgtc
ctgcaggagctcttccccagagtctcttccatctccactctggacatctcagacaacggt
ttggatgccgacttgctcacggttctgcccgccctctcccgacaccactcgctgaaacac
cttcatctcggcaagaacttcaacatcaaaaacagagttttggatgaagtcctgcagaag
ttggtgcagctcatacaagaagaggaatgtgccctgcagaccttgtcgctgaccgactcg
cgcctccgttcccggggtacggttctggtcaacgccctggggagcaacacctgcctgagg
aaggtggatctgagcggcaacaacatggacgacatcggcgccaagatgctgagcaaagcc
ctgcagattaacaccacgctccggagcgtgacatgggatcgcaacagtacctctgcagcg
ggatttcttgacgtggccagagcacttgaacataatttcaccctgcagtacatgcctctc
cccctgagcgacatcagtcaggcgtaccgtagcgcccccgagaggacggagcaggcactg
accaagatccaacgagctctggtgaggaacaaccagactcagcggttctcccagcgccag
gctctgcggctgcatcaaggcctcgtcaccagcaccgcagagcaggtgatggagcgtctg
tgcgcacgcgttcagcagcaggtgtgcctgctacgaggcgtcggtgaagcggaggatatt
caggcggccaagcaagtgctaaaggaggccaggaattcccgcgcgctgtacccctccctg
tgcgagctggcgcacgtgctctctgtggacgggccggtgcgacaacgtttggactcgctg
gctggcgagcttgccaaagctgccgacaaagaacttcaggtgatcgtcgattcaatggtg
tctctctgccgtgagctctgtcctctgtcgtccgccgcggcggagcgactgtccccgccg
ctctcgtccgtctcggaccgcgtgtccgtacctcgcgccaccattcgcaccgccctgatg
gaaagagcagcgcaggacgtccaccgagccttagaagaagtcaagctgtccgtggtgtcc
tatctcaccaactccatcgtggaccaaatcctgcaggagctctacgccacccacaagacg
ctgacccggcaggtgtctcatctgaaacgctgggatggctcgtgcgaagacgggactggc
tggaggttcaacagacatagagactctctggacatcactgaggaggagctcggcaccagt
atagacacaatagccattaagaagcgcagctcgagaacgagacgaatacgacccgtctcc
accaggctgagtctctgcgacgactccagctcctcgccgcccccttccatcccgtcctat
tccacacctctgtcccgctcaacctcctgggagggcctgtctgagttgcccacgcagggt
ctgcccctccaccacgtgaccagagtccgcccgagacctccgcgcaggcacaaaggagga
taccttccggctgagacgcagtgtagtgaaaatggaggaataagcccgctggatgatgga
ctgccagatttctatactaaaagagtccttccagacagtcaactctcctctttgcacaac
acgcactcgctgaggaggaagaagaggaggaacgtgctcgccatcttcggtttccgcaga
aaccgcaaccagaccaaccaggagtcggacgtcgacttttacggcgagcacgccgttgct
acggcaccatcgggggcagccacagagaacgtgtacacactcctccagcccccaagggcc
aaagcagggtctcccggagatagacccgatgggaagaatactctggttctgagtctgcca
ccacccatgtcgggcattccgtattcagtgatggcaggaagcaaacaccccttttactcc
cccattgagcgctccgaaaaagatgcggggcccggtgatcatccgccgaaagaggccgac
aagtattgggcggacgacaagcagaggaccagcgaggttctgcaggccgaggacatatgg
ctggacaccaggacgggcgagcggcacgtggagaggcggcgctcggacgagaggccaggg
gaggcgtggaccgtggacagacacccggaccgacaaatagacagacagtggacggcggag
agacacacgcagtggcagattgatcgcaagatggagagacagcggctgggcggcaggcag
atagaccgctcgtggtcggaaggcaagcagacggacgtgcagctagatgcccagttgaca
gacagaagtgtctggaagcccgacagacatcacttcactccgaggccgttgccgccgtac
ccctcggacaggacgccctcgcccaaacaggaagtgagcgccgaggtggacgcacagggg
gaaaggcgggtcagtcccgattcttgcccggaagggtggaggagcggctacggcgggcga
gcggcccccaaacctgaacccccgccgcaaagtagcaaacccaatttgtccaaactacgg
cagaggcatcgggtggagagctcagacacactacctgaagaagatgacgatgtccagagg
gaaccggccaagaaggaccaggaaaaaagaagagaccaggagactcaacctccgccgatt
cccgaaaagccaaaggcgacgtcgtacgtgactttcctgaaagagcctgccccggagagg
agcttgccccctccacctttgccccctccgttcggcagacatgcgcacgggctgcccgac
agagctgccagtcaaggtgaagaaggattgcgccctcaggcacctatcaagcctcaaagg
aaccggaaagccatgtcgtgcgacgcaggcacggacagggacagccccaatagcattgag
aagccccccaatcgcaaacccccagagaaaaagcctagactgccccaaaacagaaataag
tcactggacttgtctgacagcttcaactcaacacatggtcacagcgagttggtgtga
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integrated database retrieval system
